RNA–Protein interactions for RNA: ENST00000453933.5

HMG20B-206, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-206ENST00000453933 NISCHQ9Y2I1 1504 aa55.34■■■■■ 6.45
HMG20B-206ENST00000453933 ABCC9O60706 1549 aa50.51■■■■■ 5.68
HMG20B-206ENST00000453933 CCDC180Q9P1Z9 1646 aa49.76■■■■■ 5.56
HMG20B-206ENST00000453933 DNAJC5BQ9UF47 199 aa48.01■■■■■ 5.28
HMG20B-206ENST00000453933 RB1CC1Q8TDY2 1594 aa47.71■■■■■ 5.23
HMG20B-206ENST00000453933 NACADO15069 1562 aa47.26■■■■■ 5.16
HMG20B-206ENST00000453933 DCAF8L2P0C7V8 631 aa47.11■■■■■ 5.13
HMG20B-206ENST00000453933 PABPN1Q86U42 306 aaKnown RBP eCLIP47.02■■■■■ 5.12
HMG20B-206ENST00000453933 UNC13AQ9UPW8 1703 aa46.55■■■■■ 5.04
HMG20B-206ENST00000453933 MYO15BQ96JP2 1530 aa46.42■■■■■ 5.02
HMG20B-206ENST00000453933 BICRAQ9NZM4 1560 aa46.4■■■■■ 5.02
HMG20B-206ENST00000453933 ZCCHC6Q5VYS8 1495 aaKnown RBP45.71■■■■■ 4.91
HMG20B-206ENST00000453933 DCAF1Q9Y4B6 1507 aa45.62■■■■■ 4.89
HMG20B-206ENST00000453933 SHROOM4Q9ULL8 1493 aa45.62■■■■■ 4.89
HMG20B-206ENST00000453933 CECR2Q9BXF3 1484 aa45.54■■■■■ 4.88
HMG20B-206ENST00000453933 CC2D2AQ9P2K1 1620 aa45.52■■■■■ 4.88
HMG20B-206ENST00000453933 SCRIBQ14160 1630 aa45.4■■■■■ 4.86
HMG20B-206ENST00000453933 EIF4G1Q04637 1599 aaKnown RBP45.28■■■■■ 4.84
HMG20B-206ENST00000453933 DNAJC5Q9H3Z4 198 aa44.44■■■■■ 4.7
HMG20B-206ENST00000453933 NCAPD3P42695 1498 aa43.71■■■■■ 4.59
HMG20B-206ENST00000453933 CUX2O14529 1486 aa43.68■■■■■ 4.58
HMG20B-206ENST00000453933 ERCC6Q03468 1493 aa43.59■■■■■ 4.57
HMG20B-206ENST00000453933 ATAD2BQ9ULI0 1458 aa43.51■■■■■ 4.56
HMG20B-206ENST00000453933 SMARCA2P51531 1590 aa43.27■■■■■ 4.52
HMG20B-206ENST00000453933 HMGXB3Q12766 1538 aa43.24■■■■■ 4.51
HMG20B-206ENST00000453933 SMARCA4P51532 1647 aa43.24■■■■■ 4.51
HMG20B-206ENST00000453933 NESP48681 1621 aa43.23■■■■■ 4.51
HMG20B-206ENST00000453933 BAZ1BQ9UIG0 1483 aaKnown RBP43.01■■■■■ 4.48
HMG20B-206ENST00000453933 BAZ1AQ9NRL2 1556 aaPredicted RBP42.95■■■■■ 4.47
HMG20B-206ENST00000453933 PEG3Q9GZU2 1588 aa42.82■■■■■ 4.44
HMG20B-206ENST00000453933 THOC2Q8NI27 1593 aaKnown RBP42.79■■■■■ 4.44
HMG20B-206ENST00000453933 LAMC3Q9Y6N6 1575 aa42.73■■■■■ 4.43
HMG20B-206ENST00000453933 MROH2BQ7Z745 1585 aa42.66■■■■■ 4.42
HMG20B-206ENST00000453933 PDS5BQ9NTI5 1447 aa42.57■■■■■ 4.41
HMG20B-206ENST00000453933 KIF21AQ7Z4S6 1674 aa42.51■■■■■ 4.4
HMG20B-206ENST00000453933 CADPSQ9ULU8 1353 aa42.38■■■■■ 4.37
HMG20B-206ENST00000453933 TRIM41Q8WV44 630 aa42.27■■■■■ 4.36
HMG20B-206ENST00000453933 MRC2Q9UBG0 1479 aa42.22■■■■■ 4.35
HMG20B-206ENST00000453933 WDR62O43379 1518 aa42.1■■■■■ 4.33
HMG20B-206ENST00000453933 WIZO95785 1651 aa42.07■■■■■ 4.33
HMG20B-206ENST00000453933 CEP164Q9UPV0 1460 aa41.93■■■■■ 4.3
HMG20B-206ENST00000453933 FANCD2Q9BXW9 1451 aa41.87■■■■■ 4.29
HMG20B-206ENST00000453933 CFTRP13569 1480 aa41.75■■■■■ 4.27
HMG20B-206ENST00000453933 OSCARQ8IYS5 282 aa41.71■■■■■ 4.27
HMG20B-206ENST00000453933 RSF1Q96T23 1441 aaPredicted RBP41.61■■■■■ 4.25
HMG20B-206ENST00000453933 URB2Q14146 1524 aaKnown RBP41.57■■■■■ 4.25
HMG20B-206ENST00000453933 TOP2AP11388 1531 aaKnown RBP41.49■■■■■ 4.23
HMG20B-206ENST00000453933 ZNF608Q9ULD9 1512 aaPredicted RBP41.18■■■■■ 4.18
HMG20B-206ENST00000453933 IFT140Q96RY7 1462 aa41.13■■■■■ 4.17
HMG20B-206ENST00000453933 RIMBP3CA6NJZ7 1639 aa41.11■■■■■ 4.17
HMG20B-206ENST00000453933 RIMBP3BA6NNM3 1639 aa41.11■■■■■ 4.17
HMG20B-206ENST00000453933 RIMBP3Q9UFD9 1639 aa41.11■■■■■ 4.17
HMG20B-206ENST00000453933 CCDC88BA6NC98 1476 aa41.11■■■■■ 4.17
HMG20B-206ENST00000453933 PRDM2Q13029 1718 aa41.05■■■■■ 4.16
HMG20B-206ENST00000453933 TOPBP1Q92547 1522 aa41■■■■■ 4.15
HMG20B-206ENST00000453933 ARHGEF11O15085 1522 aa40.96■■■■■ 4.15
HMG20B-206ENST00000453933 ABCC8Q09428 1581 aa40.84■■■■■ 4.13
HMG20B-206ENST00000453933 CYB5RLQ6IPT4 315 aa40.81■■■■■ 4.12
HMG20B-206ENST00000453933 EIF4G3O43432 1585 aaKnown RBP40.81■■■■■ 4.12
HMG20B-206ENST00000453933 AQRO60306 1485 aaKnown RBP eCLIP40.76■■■■■ 4.121e-7■■■■■ 38.1
HMG20B-206ENST00000453933 DNMBPQ6XZF7 1577 aa40.75■■■■■ 4.11
HMG20B-206ENST00000453933 TARBP1Q13395 1621 aaKnown RBP40.65■■■■■ 4.1
HMG20B-206ENST00000453933 FBLN2P98095 1184 aa40.63■■■■■ 4.09
HMG20B-206ENST00000453933 CHD1O14646 1710 aa40.57■■■■■ 4.09
HMG20B-206ENST00000453933 POLA1P09884 1462 aaPredicted RBP40.55■■■■■ 4.08
HMG20B-206ENST00000453933 ARAP1Q96P48 1450 aa40.53■■■■■ 4.08
HMG20B-206ENST00000453933 TRHP20396 242 aaPredicted RBP40.52■■■■■ 4.08
HMG20B-206ENST00000453933 RAD54L2Q9Y4B4 1467 aa40.47■■■■■ 4.07
HMG20B-206ENST00000453933 TDRD9Q8NDG6 1382 aaKnown RBP40.43■■■■■ 4.06
HMG20B-206ENST00000453933 SOGA1O94964 1423 aa40.41■■■■■ 4.06
HMG20B-206ENST00000453933 SNAPC4Q5SXM2 1469 aa40.26■■■■■ 4.03
HMG20B-206ENST00000453933 FGD5Q6ZNL6 1462 aa40.22■■■■■ 4.03
HMG20B-206ENST00000453933 CHMP7Q8WUX9 453 aaPredicted RBP40.22■■■■■ 4.03
HMG20B-206ENST00000453933 CLASP1Q7Z460 1538 aa40.17■■■■■ 4.02
HMG20B-206ENST00000453933 WDR97A6NE52 1622 aa40.1■■■■■ 4.01
HMG20B-206ENST00000453933 CUX1P39880 1505 aa40.1■■■■■ 4.01
HMG20B-206ENST00000453933 MAGI1Q96QZ7 1491 aaPredicted RBP40.09■■■■■ 4.01
HMG20B-206ENST00000453933 GRIN2BQ13224 1484 aa40.07■■■■■ 4
HMG20B-206ENST00000453933 SYNJ1O43426 1573 aa40.06■■■■■ 4
HMG20B-206ENST00000453933 SYNJ2O15056 1496 aa40■■■■□ 3.99
HMG20B-206ENST00000453933 GAPVD1Q14C86 1478 aa39.87■■■■□ 3.97
HMG20B-206ENST00000453933 PBRM1Q86U86 1689 aa39.74■■■■□ 3.95
HMG20B-206ENST00000453933 AEBP2Q6ZN18 517 aaPredicted RBP39.72■■■■□ 3.95
HMG20B-206ENST00000453933 ABCA10Q8WWZ4 1543 aa39.71■■■■□ 3.95
HMG20B-206ENST00000453933 ABCA5Q8WWZ7 1642 aa39.65■■■■□ 3.94
HMG20B-206ENST00000453933 ERCC6L2Q5T890 1561 aa39.56■■■■□ 3.92
HMG20B-206ENST00000453933 GRIN2AQ12879 1464 aa39.55■■■■□ 3.92
HMG20B-206ENST00000453933 WRNQ14191 1432 aaPredicted RBP eCLIP39.48■■■■□ 3.91
HMG20B-206ENST00000453933 NUP160Q12769 1436 aa39.45■■■■□ 3.91
HMG20B-206ENST00000453933 SUPT5HO00267 1087 aaKnown RBP39.42■■■■□ 3.9
HMG20B-206ENST00000453933 CEP170Q5SW79 1584 aa39.42■■■■□ 3.9
HMG20B-206ENST00000453933 ADAMTS12P58397 1594 aa39.4■■■■□ 3.9
HMG20B-206ENST00000453933 FHAD1B1AJZ9 1412 aa39.33■■■■□ 3.89
HMG20B-206ENST00000453933 SHROOM2Q13796 1616 aa39.27■■■■□ 3.88
HMG20B-206ENST00000453933 TOP2BQ02880 1626 aa39.25■■■■□ 3.87
HMG20B-206ENST00000453933 BIVM-ERCC5R4GMW8 1640 aa39.22■■■■□ 3.87
HMG20B-206ENST00000453933 ERICH3Q5RHP9 1530 aa39.18■■■■□ 3.86
HMG20B-206ENST00000453933 PRG4Q92954 1404 aaPredicted RBP39.15■■■■□ 3.86
HMG20B-206ENST00000453933 JPH4Q96JJ6 628 aa39.13■■■■□ 3.85
HMG20B-206ENST00000453933 KIF13AQ9H1H9 1805 aa39■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms