Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.88■■□□□ 1.89
VPS16Q9H269 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC26.88■■□□□ 1.89
VPS16Q9H269 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
VPS16Q9H269 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
VPS16Q9H269 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
VPS16Q9H269 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
VPS16Q9H269 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
VPS16Q9H269 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
VPS16Q9H269 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS16Q9H269 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
VPS16Q9H269 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
VPS16Q9H269 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.86■■□□□ 1.89
VPS16Q9H269 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.86■■□□□ 1.89
VPS16Q9H269 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.85■■□□□ 1.89
VPS16Q9H269 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L13-201ENST00000554103 1267 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L15-201ENST00000611059 1267 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L23-201ENST00000615195 1269 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L24-201ENST00000617576 1269 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L22-201ENST00000618238 1269 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L20-201ENST00000619712 1269 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L21-201ENST00000622058 1269 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L10-201ENST00000622460 1267 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 DUX4L25-201ENST00000624915 1269 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.85■■□□□ 1.89
VPS16Q9H269 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
VPS16Q9H269 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.85■■□□□ 1.89
VPS16Q9H269 ERN1-208ENST00000606895 2068 ntBASIC26.85■■□□□ 1.89
VPS16Q9H269 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS16Q9H269 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.84■■□□□ 1.89
VPS16Q9H269 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS16Q9H269 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS16Q9H269 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
VPS16Q9H269 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS16Q9H269 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS16Q9H269 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
VPS16Q9H269 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS16Q9H269 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS16Q9H269 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
VPS16Q9H269 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS16Q9H269 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.89
VPS16Q9H269 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
VPS16Q9H269 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS16Q9H269 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
VPS16Q9H269 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
VPS16Q9H269 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
VPS16Q9H269 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
VPS16Q9H269 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC26.81■■□□□ 1.88
VPS16Q9H269 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
VPS16Q9H269 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
VPS16Q9H269 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS16Q9H269 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS16Q9H269 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS16Q9H269 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS16Q9H269 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.8■■□□□ 1.88
VPS16Q9H269 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
VPS16Q9H269 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
VPS16Q9H269 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
VPS16Q9H269 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
VPS16Q9H269 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
VPS16Q9H269 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
VPS16Q9H269 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
VPS16Q9H269 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
VPS16Q9H269 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
VPS16Q9H269 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
VPS16Q9H269 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.78■■□□□ 1.88
VPS16Q9H269 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.78■■□□□ 1.88
VPS16Q9H269 DUX4L11-201ENST00000611504 1267 ntBASIC26.78■■□□□ 1.88
VPS16Q9H269 DUX4L12-201ENST00000614593 1267 ntBASIC26.78■■□□□ 1.88
VPS16Q9H269 DUX4L14-201ENST00000621227 1267 ntBASIC26.78■■□□□ 1.88
VPS16Q9H269 MIR219A2-201ENST00000608502 1504 ntBASIC26.78■■□□□ 1.88
VPS16Q9H269 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
VPS16Q9H269 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.77■■□□□ 1.88
VPS16Q9H269 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
VPS16Q9H269 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
VPS16Q9H269 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
VPS16Q9H269 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.77■■□□□ 1.88
VPS16Q9H269 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.76■■□□□ 1.87
VPS16Q9H269 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
VPS16Q9H269 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
VPS16Q9H269 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.76■■□□□ 1.87
VPS16Q9H269 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
VPS16Q9H269 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
VPS16Q9H269 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS16Q9H269 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS16Q9H269 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
VPS16Q9H269 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
VPS16Q9H269 AC008813.1-201ENST00000536597 885 ntBASIC26.75■■□□□ 1.87
VPS16Q9H269 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
VPS16Q9H269 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
VPS16Q9H269 AC010501.1-201ENST00000606270 1962 ntBASIC26.74■■□□□ 1.87
VPS16Q9H269 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.74■■□□□ 1.87
VPS16Q9H269 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.73■■□□□ 1.87
VPS16Q9H269 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC26.73■■□□□ 1.87
VPS16Q9H269 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
VPS16Q9H269 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.73■■□□□ 1.87
VPS16Q9H269 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
VPS16Q9H269 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
VPS16Q9H269 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC26.72■■□□□ 1.87
VPS16Q9H269 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms