Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.34■■■□□ 2.13
SNRNP48Q6IEG0 MIR6765-201ENST00000614092 87 ntBASIC28.34■■■□□ 2.13
SNRNP48Q6IEG0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SNRNP48Q6IEG0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
SNRNP48Q6IEG0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 DRD5P2-201ENST00000421395 2012 ntBASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.32■■■□□ 2.12
SNRNP48Q6IEG0 AC010980.1-201ENST00000587192 1142 ntBASIC28.31■■■□□ 2.12
SNRNP48Q6IEG0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SNRNP48Q6IEG0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SNRNP48Q6IEG0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
SNRNP48Q6IEG0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SNRNP48Q6IEG0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
SNRNP48Q6IEG0 AC018755.3-202ENST00000596210 929 ntBASIC28.29■■■□□ 2.12
SNRNP48Q6IEG0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SNRNP48Q6IEG0 AC139795.1-202ENST00000500444 432 ntBASIC28.27■■■□□ 2.12
SNRNP48Q6IEG0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.27■■■□□ 2.12
SNRNP48Q6IEG0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.25■■■□□ 2.11
SNRNP48Q6IEG0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNRNP48Q6IEG0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.25■■■□□ 2.11
SNRNP48Q6IEG0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 AC074183.2-201ENST00000623112 922 ntBASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 KRT8P33-201ENST00000508125 1423 ntBASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 AL451085.2-201ENST00000605085 799 ntBASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
SNRNP48Q6IEG0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.2■■■□□ 2.1
SNRNP48Q6IEG0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNRNP48Q6IEG0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.2■■■□□ 2.1
SNRNP48Q6IEG0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.2■■■□□ 2.1
SNRNP48Q6IEG0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.19■■■□□ 2.1
SNRNP48Q6IEG0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNRNP48Q6IEG0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNRNP48Q6IEG0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SNRNP48Q6IEG0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.18■■■□□ 2.1
SNRNP48Q6IEG0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNRNP48Q6IEG0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 PVT1_1.1-201ENST00000615125 194 ntBASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 AL035685.1-201ENST00000636663 812 ntBASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 AL449106.1-201ENST00000608517 1980 ntBASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 285 ms