Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.467e-7■■■■□ 26.5
EWSR1Q01844 ATP8B2-203ENST00000368490 473 ntTSL 317.31■□□□□ 0.369e-7■■■■□ 26.5
EWSR1Q01844 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.53■□□□□ 0.243e-6■■■■□ 26.5
EWSR1Q01844 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.433e-6■■■■□ 26.5
EWSR1Q01844 CDK17-202ENST00000542666 1769 ntTSL 2 BASIC9.54□□□□□ -0.883e-6■■■■□ 26.5
EWSR1Q01844 ASPSCR1-215ENST00000583142 532 ntTSL 38.17□□□□□ -1.11e-6■■■■□ 26.4
EWSR1Q01844 PLXNB2-205ENST00000432455 1620 ntTSL 514.9□□□□□ -0.024e-7■■■■□ 26.4
EWSR1Q01844 SPPL2B-208ENST00000612623 495 ntTSL 512.28□□□□□ -0.441e-6■■■■□ 26.4
EWSR1Q01844 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.219e-7■■■■□ 26.4
EWSR1Q01844 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.99■□□□□ 0.159e-7■■■■□ 26.4
EWSR1Q01844 MFSD10-203ENST00000503596 1589 ntTSL 515.23■□□□□ 0.039e-7■■■■□ 26.4
EWSR1Q01844 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.029e-7■■■■□ 26.4
EWSR1Q01844 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.06■□□□□ 09e-7■■■■□ 26.4
EWSR1Q01844 MFSD10-208ENST00000509676 1178 ntTSL 512.26□□□□□ -0.459e-7■■■■□ 26.4
EWSR1Q01844 LAMA5-202ENST00000370677 1674 ntTSL 215.86■□□□□ 0.131e-6■■■■□ 26.4
EWSR1Q01844 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.81e-6■■■■□ 26.4
EWSR1Q01844 CBFA2T3-207ENST00000564416 399 ntTSL 511.3□□□□□ -0.63e-8■■■■□ 26.4
EWSR1Q01844 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.446e-7■■■■□ 26.3
EWSR1Q01844 CD81-209ENST00000492627 886 ntTSL 3 BASIC10.91□□□□□ -0.666e-7■■■■□ 26.3
EWSR1Q01844 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.35■□□□□ 0.852e-6■■■■□ 26.3
EWSR1Q01844 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.442e-6■■■■□ 26.3
EWSR1Q01844 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.322e-6■■■■□ 26.3
EWSR1Q01844 KLF16-202ENST00000541015 1134 ntTSL 1 (best)16.83■□□□□ 0.282e-6■■■■□ 26.3
EWSR1Q01844 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.17□□□□□ -0.33e-7■■■■□ 26.3
EWSR1Q01844 STAT5B-202ENST00000415845 559 ntTSL 45.96□□□□□ -1.461e-8■■■■□ 26.3
EWSR1Q01844 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.171e-6■■■■□ 26.3
EWSR1Q01844 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.271e-6■■■■□ 26.3
EWSR1Q01844 FGFRL1-206ENST00000512174 571 ntTSL 315.03■□□□□ -01e-6■■■■□ 26.3
EWSR1Q01844 FGFRL1-204ENST00000507339 562 ntTSL 414□□□□□ -0.171e-6■■■■□ 26.3
EWSR1Q01844 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.461e-6■■■■□ 26.3
EWSR1Q01844 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.61e-6■■■■□ 26.3
EWSR1Q01844 JAG2-203ENST00000546616 2275 ntTSL 517.5■□□□□ 0.391e-6■■■■□ 26.2
EWSR1Q01844 TBKBP1-203ENST00000578982 733 ntTSL 314.03□□□□□ -0.162e-6■■■■□ 26.2
EWSR1Q01844 AGPAT3-206ENST00000422850 1003 ntTSL 511.69□□□□□ -0.549e-7■■■■□ 26.2
EWSR1Q01844 AGPAT3-210ENST00000457068 924 ntTSL 311.69□□□□□ -0.549e-7■■■■□ 26.2
EWSR1Q01844 TBKBP1-202ENST00000537587 705 ntTSL 311.08□□□□□ -0.642e-6■■■■□ 26.2
EWSR1Q01844 AGPAT3-203ENST00000398058 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.749e-7■■■■□ 26.2
EWSR1Q01844 AGPAT3-216ENST00000497909 773 ntTSL 39.98□□□□□ -0.819e-7■■■■□ 26.2
EWSR1Q01844 AP001347.1-203ENST00000448463 780 ntTSL 29.45□□□□□ -0.92e-6■■■■□ 26.2
EWSR1Q01844 AGPAT3-217ENST00000498670 791 ntTSL 39.27□□□□□ -0.939e-7■■■■□ 26.2
EWSR1Q01844 AGPAT3-209ENST00000448845 392 ntTSL 58.05□□□□□ -1.129e-7■■■■□ 26.2
EWSR1Q01844 AP001347.1-201ENST00000428809 1332 ntTSL 1 (best) BASIC5.98□□□□□ -1.452e-6■■■■□ 26.2
EWSR1Q01844 AP001347.1-202ENST00000432621 1084 ntTSL 1 (best)5.9□□□□□ -1.462e-6■■■■□ 26.2
EWSR1Q01844 DDX3X-214ENST00000622373 2129 nt17.6■□□□□ 0.411e-7■■■■□ 26.2
EWSR1Q01844 DDX3X-210ENST00000615313 568 ntTSL 414.18□□□□□ -0.141e-7■■■■□ 26.2
EWSR1Q01844 DDX3X-208ENST00000611546 442 ntTSL 512.57□□□□□ -0.41e-7■■■■□ 26.2
EWSR1Q01844 DDX3X-213ENST00000622198 409 ntTSL 412.57□□□□□ -0.41e-7■■■■□ 26.2
EWSR1Q01844 EIF4A1-206ENST00000577929 696 ntTSL 213.98□□□□□ -0.174e-13■■■■□ 26.2
EWSR1Q01844 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.46□□□□□ -0.411e-7■■■■□ 26.2
EWSR1Q01844 C22orf34-205ENST00000416411 542 ntTSL 410.5□□□□□ -0.731e-7■■■■□ 26.2
EWSR1Q01844 KDM4B-210ENST00000592175 562 ntTSL 411.91□□□□□ -0.56e-7■■■■□ 26.2
EWSR1Q01844 BAIAP2-225ENST00000576225 2316 ntTSL 215.62■□□□□ 0.092e-6■■■■□ 26.2
EWSR1Q01844 BAIAP2-230ENST00000577097 1014 ntTSL 313.84□□□□□ -0.192e-6■■■■□ 26.2
EWSR1Q01844 BAIAP2-216ENST00000574027 604 ntTSL 410.97□□□□□ -0.652e-6■■■■□ 26.2
EWSR1Q01844 BAIAP2-222ENST00000575841 509 ntTSL 29.64□□□□□ -0.872e-6■■■■□ 26.2
EWSR1Q01844 ZNF12-202ENST00000394917 662 ntTSL 318.23■□□□□ 0.514e-7■■■■□ 26.1
EWSR1Q01844 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.284e-7■■■■□ 26.1
EWSR1Q01844 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.184e-7■■■■□ 26.1
EWSR1Q01844 WDR60-203ENST00000444851 2769 ntTSL 1 (best)11.76□□□□□ -0.533e-9■■■■□ 26.1
EWSR1Q01844 WDR60-205ENST00000467220 5410 ntTSL 210.97□□□□□ -0.653e-9■■■■□ 26.1
EWSR1Q01844 PNCK-217ENST00000460106 586 ntTSL 411.7□□□□□ -0.546e-7■■■■□ 26.1
EWSR1Q01844 ARFRP1-204ENST00000609537 593 ntTSL 310.58□□□□□ -0.729e-8■■■■□ 26.1
EWSR1Q01844 MSH6-203ENST00000420813 491 ntTSL 412.83□□□□□ -0.368e-9■■■■□ 26.1
EWSR1Q01844 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC5.69□□□□□ -1.58e-9■■■■□ 26.1
EWSR1Q01844 CSNK1G2-210ENST00000614707 249 ntTSL 210.73□□□□□ -0.698e-7■■■■□ 26.1
EWSR1Q01844 AGRN-205ENST00000469403 899 ntTSL 320.33■□□□□ 0.851e-7■■■■□ 26
EWSR1Q01844 AGRN-206ENST00000477585 707 ntTSL 317.71■□□□□ 0.431e-7■■■■□ 26
EWSR1Q01844 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.13■□□□□ 0.497e-7■■■■□ 26
EWSR1Q01844 SLC12A7-204ENST00000513223 1066 ntTSL 512.05□□□□□ -0.482e-6■■■■□ 26
EWSR1Q01844 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.31e-6■■■■□ 26
EWSR1Q01844 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.86□□□□□ -1.632e-7■■■■□ 26
EWSR1Q01844 WDR1-214ENST00000509695 467 ntTSL 411.4□□□□□ -0.586e-7■■■■□ 25.9
EWSR1Q01844 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.459e-7■■■■□ 25.9
EWSR1Q01844 CSNK1G2-209ENST00000591752 648 ntTSL 512.46□□□□□ -0.417e-7■■■■□ 25.9
EWSR1Q01844 TNK2-210ENST00000433111 580 ntTSL 417.8■□□□□ 0.449e-7■■■■□ 25.9
EWSR1Q01844 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.943e-7■■■■□ 25.9
EWSR1Q01844 MKNK2-205ENST00000586828 1503 ntTSL 215.28■□□□□ 0.043e-7■■■■□ 25.9
EWSR1Q01844 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.173e-7■■■■□ 25.9
EWSR1Q01844 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.743e-7■■■■□ 25.9
EWSR1Q01844 RAI1-204ENST00000489697 1570 ntTSL 312.22□□□□□ -0.451e-6■■■■□ 25.9
EWSR1Q01844 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.12e-8■■■■□ 25.9
EWSR1Q01844 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.052e-8■■■■□ 25.9
EWSR1Q01844 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.132e-8■■■■□ 25.9
EWSR1Q01844 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.352e-8■■■■□ 25.9
EWSR1Q01844 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.362e-8■■■■□ 25.9
EWSR1Q01844 C21orf58-210ENST00000491666 1196 ntTSL 510.76□□□□□ -0.692e-8■■■■□ 25.9
EWSR1Q01844 C21orf58-206ENST00000417060 1072 ntAPPRIS ALT2 TSL 1 (best)10.76□□□□□ -0.692e-8■■■■□ 25.9
EWSR1Q01844 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC21.17■□□□□ 0.988e-8■■■■□ 25.9
EWSR1Q01844 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.958e-8■■■■□ 25.9
EWSR1Q01844 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.011e-6■■■■□ 25.9
EWSR1Q01844 KDM4B-207ENST00000588961 560 ntTSL 47.21□□□□□ -1.263e-7■■■■□ 25.9
EWSR1Q01844 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.23■□□□□ 0.831e-6■■■■□ 25.8
EWSR1Q01844 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.021e-6■■■■□ 25.8
EWSR1Q01844 INPP5A-204ENST00000423490 416 ntTSL 54.73□□□□□ -1.651e-6■■■■□ 25.8
EWSR1Q01844 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.836e-7■■■■□ 25.8
EWSR1Q01844 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.636e-7■■■■□ 25.8
EWSR1Q01844 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.53■□□□□ 0.566e-7■■■■□ 25.8
EWSR1Q01844 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.536e-7■■■■□ 25.8
EWSR1Q01844 TPCN2-203ENST00000534832 435 ntTSL 218.32■□□□□ 0.526e-7■■■■□ 25.8
EWSR1Q01844 RAP1GAP-203ENST00000374757 1328 ntTSL 517.82■□□□□ 0.446e-7■■■■□ 25.8
Retrieved 100 of 7,101 protein–RNA pairs in 108.7 ms