RNA–Protein interactions for RNA: ENST00000428809.5

AP001347.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP001347.1, Length 1,332 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001347.1-201ENST00000428809 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
AP001347.1-201ENST00000428809 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
AP001347.1-201ENST00000428809 NISCHQ9Y2I1 1504 aa20.23■□□□□ 0.83
AP001347.1-201ENST00000428809 SENP3Q9H4L4 574 aaPredicted RBP19.92■□□□□ 0.78
AP001347.1-201ENST00000428809 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
AP001347.1-201ENST00000428809 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
AP001347.1-201ENST00000428809 FOXD1Q16676 465 aa18.35■□□□□ 0.53
AP001347.1-201ENST00000428809 CCDC180Q9P1Z9 1646 aa18.25■□□□□ 0.51
AP001347.1-201ENST00000428809 ABCC9O60706 1549 aa17.87■□□□□ 0.45
AP001347.1-201ENST00000428809 PPP6R1Q9UPN7 881 aa17.5■□□□□ 0.39
AP001347.1-201ENST00000428809 ADRA2BP18089 450 aa17.49■□□□□ 0.39
AP001347.1-201ENST00000428809 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
AP001347.1-201ENST00000428809 RB1CC1Q8TDY2 1594 aa17.2■□□□□ 0.34
AP001347.1-201ENST00000428809 MSH5O43196 834 aa17.14■□□□□ 0.33
AP001347.1-201ENST00000428809 NACADO15069 1562 aa17.11■□□□□ 0.33
AP001347.1-201ENST00000428809 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
AP001347.1-201ENST00000428809 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
AP001347.1-201ENST00000428809 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
AP001347.1-201ENST00000428809 DCAF1Q9Y4B6 1507 aa16.78■□□□□ 0.28
AP001347.1-201ENST00000428809 DCAF8L2P0C7V8 631 aa16.74■□□□□ 0.27
AP001347.1-201ENST00000428809 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
AP001347.1-201ENST00000428809 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
AP001347.1-201ENST00000428809 SCRIBQ14160 1630 aa16.53■□□□□ 0.24
AP001347.1-201ENST00000428809 PABPN1Q86U42 306 aaKnown RBP eCLIP16.52■□□□□ 0.24
AP001347.1-201ENST00000428809 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
AP001347.1-201ENST00000428809 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
AP001347.1-201ENST00000428809 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
AP001347.1-201ENST00000428809 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
AP001347.1-201ENST00000428809 CC2D2AQ9P2K1 1620 aa16.23■□□□□ 0.19
AP001347.1-201ENST00000428809 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
AP001347.1-201ENST00000428809 CECR2Q9BXF3 1484 aa16.11■□□□□ 0.17
AP001347.1-201ENST00000428809 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
AP001347.1-201ENST00000428809 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
AP001347.1-201ENST00000428809 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
AP001347.1-201ENST00000428809 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.12
AP001347.1-201ENST00000428809 KCNA4P22459 653 aa15.82■□□□□ 0.12
AP001347.1-201ENST00000428809 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
AP001347.1-201ENST00000428809 SMARCA2P51531 1590 aa15.75■□□□□ 0.11
AP001347.1-201ENST00000428809 BAZ1AQ9NRL2 1556 aaPredicted RBP15.74■□□□□ 0.11
AP001347.1-201ENST00000428809 HMGXB3Q12766 1538 aa15.74■□□□□ 0.11
AP001347.1-201ENST00000428809 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
AP001347.1-201ENST00000428809 ATAD2BQ9ULI0 1458 aa15.7■□□□□ 0.1
AP001347.1-201ENST00000428809 PEG3Q9GZU2 1588 aa15.67■□□□□ 0.1
AP001347.1-201ENST00000428809 BAZ1BQ9UIG0 1483 aaKnown RBP15.6■□□□□ 0.09
AP001347.1-201ENST00000428809 RNF216Q9NWF9 866 aaPredicted RBP15.56■□□□□ 0.08
AP001347.1-201ENST00000428809 MROH2BQ7Z745 1585 aa15.56■□□□□ 0.08
AP001347.1-201ENST00000428809 HOXD11P31277 338 aaPredicted RBP15.51■□□□□ 0.07
AP001347.1-201ENST00000428809 NPM3O75607 178 aaKnown RBP15.49■□□□□ 0.07
AP001347.1-201ENST00000428809 ERCC6Q03468 1493 aa15.48■□□□□ 0.07
AP001347.1-201ENST00000428809 LAMC3Q9Y6N6 1575 aa15.43■□□□□ 0.06
AP001347.1-201ENST00000428809 CUX2O14529 1486 aa15.43■□□□□ 0.06
AP001347.1-201ENST00000428809 WIZO95785 1651 aa15.42■□□□□ 0.06
AP001347.1-201ENST00000428809 NESP48681 1621 aa15.39■□□□□ 0.05
AP001347.1-201ENST00000428809 THOC2Q8NI27 1593 aaKnown RBP15.36■□□□□ 0.05
AP001347.1-201ENST00000428809 KIF21AQ7Z4S6 1674 aa15.34■□□□□ 0.05
AP001347.1-201ENST00000428809 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
AP001347.1-201ENST00000428809 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
AP001347.1-201ENST00000428809 RSF1Q96T23 1441 aaPredicted RBP15.26■□□□□ 0.03
AP001347.1-201ENST00000428809 PDS5BQ9NTI5 1447 aa15.25■□□□□ 0.03
AP001347.1-201ENST00000428809 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.03
AP001347.1-201ENST00000428809 PRDM2Q13029 1718 aa15.21■□□□□ 0.02
AP001347.1-201ENST00000428809 CADPSQ9ULU8 1353 aa15.2■□□□□ 0.02
AP001347.1-201ENST00000428809 WDR62O43379 1518 aa15.17■□□□□ 0.02
AP001347.1-201ENST00000428809 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
AP001347.1-201ENST00000428809 CEP164Q9UPV0 1460 aa15.14■□□□□ 0.01
AP001347.1-201ENST00000428809 CFTRP13569 1480 aa15.12■□□□□ 0.01
AP001347.1-201ENST00000428809 FANCD2Q9BXW9 1451 aa15.09■□□□□ 0.01
AP001347.1-201ENST00000428809 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
AP001347.1-201ENST00000428809 DNAJC5Q9H3Z4 198 aa15.02■□□□□ -0
AP001347.1-201ENST00000428809 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
AP001347.1-201ENST00000428809 URB2Q14146 1524 aaKnown RBP14.96□□□□□ -0.02
AP001347.1-201ENST00000428809 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
AP001347.1-201ENST00000428809 DNMBPQ6XZF7 1577 aa14.86□□□□□ -0.03
AP001347.1-201ENST00000428809 TOPBP1Q92547 1522 aa14.84□□□□□ -0.03
AP001347.1-201ENST00000428809 ABCC8Q09428 1581 aa14.82□□□□□ -0.04
AP001347.1-201ENST00000428809 IFT140Q96RY7 1462 aa14.81□□□□□ -0.04
AP001347.1-201ENST00000428809 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
AP001347.1-201ENST00000428809 TARBP1Q13395 1621 aaKnown RBP14.73□□□□□ -0.05
AP001347.1-201ENST00000428809 ZNF608Q9ULD9 1512 aaPredicted RBP14.71□□□□□ -0.05
AP001347.1-201ENST00000428809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.71□□□□□ -0.05
AP001347.1-201ENST00000428809 POLA1P09884 1462 aaPredicted RBP14.7□□□□□ -0.06
AP001347.1-201ENST00000428809 WDR97A6NE52 1622 aa14.69□□□□□ -0.06
AP001347.1-201ENST00000428809 CHD1O14646 1710 aa14.64□□□□□ -0.07
AP001347.1-201ENST00000428809 CUX1P39880 1505 aa14.64□□□□□ -0.07
AP001347.1-201ENST00000428809 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
AP001347.1-201ENST00000428809 SLC4A2P04920 1241 aa14.62□□□□□ -0.07
AP001347.1-201ENST00000428809 RNF39Q9H2S5 420 aa14.59□□□□□ -0.07
AP001347.1-201ENST00000428809 PBRM1Q86U86 1689 aa14.57□□□□□ -0.08
AP001347.1-201ENST00000428809 RAD54L2Q9Y4B4 1467 aa14.56□□□□□ -0.08
AP001347.1-201ENST00000428809 SUPT5HO00267 1087 aaKnown RBP14.56□□□□□ -0.08
AP001347.1-201ENST00000428809 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
AP001347.1-201ENST00000428809 FOXD4L1Q9NU39 408 aa14.55□□□□□ -0.08
AP001347.1-201ENST00000428809 AQRO60306 1485 aaKnown RBP eCLIP14.55□□□□□ -0.08
AP001347.1-201ENST00000428809 SOGA1O94964 1423 aa14.54□□□□□ -0.08
AP001347.1-201ENST00000428809 RIMBP3CA6NJZ7 1639 aa14.54□□□□□ -0.08
AP001347.1-201ENST00000428809 RIMBP3BA6NNM3 1639 aa14.54□□□□□ -0.08
AP001347.1-201ENST00000428809 RIMBP3Q9UFD9 1639 aa14.54□□□□□ -0.08
AP001347.1-201ENST00000428809 BIVM-ERCC5R4GMW8 1640 aa14.54□□□□□ -0.08
AP001347.1-201ENST00000428809 ZBTB22O15209 634 aa14.53□□□□□ -0.08
AP001347.1-201ENST00000428809 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms