RNA–Protein interactions for RNA: ENST00000542666.5

CDK17-202, Transcript of cyclin dependent kinase 17, humanhuman

TSL 2 BASIC

Gene CDK17, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-202ENST00000542666 NISCHQ9Y2I1 1504 aa27.18■■□□□ 1.94
CDK17-202ENST00000542666 CCDC180Q9P1Z9 1646 aa23.73■■□□□ 1.39
CDK17-202ENST00000542666 ZCCHC6Q5VYS8 1495 aaKnown RBP22.82■■□□□ 1.24
CDK17-202ENST00000542666 ABCC9O60706 1549 aa22.5■■□□□ 1.19
CDK17-202ENST00000542666 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
CDK17-202ENST00000542666 DCAF8L2P0C7V8 631 aa22.36■■□□□ 1.17
CDK17-202ENST00000542666 MYO15BQ96JP2 1530 aa22.23■■□□□ 1.15
CDK17-202ENST00000542666 NACADO15069 1562 aa22.11■■□□□ 1.13
CDK17-202ENST00000542666 SHROOM4Q9ULL8 1493 aa22.07■■□□□ 1.12
CDK17-202ENST00000542666 RB1CC1Q8TDY2 1594 aa21.93■■□□□ 1.1
CDK17-202ENST00000542666 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
CDK17-202ENST00000542666 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
CDK17-202ENST00000542666 BICRAQ9NZM4 1560 aa21.34■■□□□ 1.01
CDK17-202ENST00000542666 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
CDK17-202ENST00000542666 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
CDK17-202ENST00000542666 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.97
CDK17-202ENST00000542666 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
CDK17-202ENST00000542666 MROH2BQ7Z745 1585 aa21■□□□□ 0.95
CDK17-202ENST00000542666 BAZ1AQ9NRL2 1556 aaPredicted RBP20.97■□□□□ 0.95
CDK17-202ENST00000542666 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
CDK17-202ENST00000542666 AEBP2Q6ZN18 517 aaPredicted RBP20.87■□□□□ 0.93
CDK17-202ENST00000542666 WIZO95785 1651 aa20.83■□□□□ 0.92
CDK17-202ENST00000542666 PEG3Q9GZU2 1588 aa20.67■□□□□ 0.9
CDK17-202ENST00000542666 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
CDK17-202ENST00000542666 TOP2AP11388 1531 aaKnown RBP20.6■□□□□ 0.89
CDK17-202ENST00000542666 ATAD2BQ9ULI0 1458 aa20.59■□□□□ 0.89
CDK17-202ENST00000542666 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
CDK17-202ENST00000542666 BAZ1BQ9UIG0 1483 aaKnown RBP20.44■□□□□ 0.86
CDK17-202ENST00000542666 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
CDK17-202ENST00000542666 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
CDK17-202ENST00000542666 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.85
CDK17-202ENST00000542666 CCDC88BA6NC98 1476 aa20.38■□□□□ 0.85
CDK17-202ENST00000542666 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
CDK17-202ENST00000542666 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
CDK17-202ENST00000542666 CFTRP13569 1480 aa19.94■□□□□ 0.78
CDK17-202ENST00000542666 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
CDK17-202ENST00000542666 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
CDK17-202ENST00000542666 CADPSQ9ULU8 1353 aa19.87■□□□□ 0.77
CDK17-202ENST00000542666 PRDM2Q13029 1718 aa19.84■□□□□ 0.77
CDK17-202ENST00000542666 WRNQ14191 1432 aaPredicted RBP eCLIP19.78■□□□□ 0.76
CDK17-202ENST00000542666 NESP48681 1621 aa19.76■□□□□ 0.75
CDK17-202ENST00000542666 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
CDK17-202ENST00000542666 LAMC3Q9Y6N6 1575 aa19.72■□□□□ 0.75
CDK17-202ENST00000542666 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
CDK17-202ENST00000542666 BIVM-ERCC5R4GMW8 1640 aa19.66■□□□□ 0.74
CDK17-202ENST00000542666 FANCD2Q9BXW9 1451 aa19.66■□□□□ 0.74
CDK17-202ENST00000542666 CUX1P39880 1505 aa19.65■□□□□ 0.74
CDK17-202ENST00000542666 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
CDK17-202ENST00000542666 SOGA1O94964 1423 aa19.54■□□□□ 0.72
CDK17-202ENST00000542666 CEP164Q9UPV0 1460 aa19.53■□□□□ 0.72
CDK17-202ENST00000542666 FAM9AQ8IZU1 332 aaPredicted RBP19.52■□□□□ 0.72
CDK17-202ENST00000542666 KIF21AQ7Z4S6 1674 aa19.52■□□□□ 0.72
CDK17-202ENST00000542666 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
CDK17-202ENST00000542666 DNMBPQ6XZF7 1577 aa19.48■□□□□ 0.71
CDK17-202ENST00000542666 LOC105371045A0A1W2PR82 267 aa19.46■□□□□ 0.71
CDK17-202ENST00000542666 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
CDK17-202ENST00000542666 TOPBP1Q92547 1522 aa19.45■□□□□ 0.7
CDK17-202ENST00000542666 EEA1Q15075 1411 aa19.44■□□□□ 0.7
CDK17-202ENST00000542666 FGD5Q6ZNL6 1462 aa19.42■□□□□ 0.7
CDK17-202ENST00000542666 POLA1P09884 1462 aaPredicted RBP19.35■□□□□ 0.69
CDK17-202ENST00000542666 MRC2Q9UBG0 1479 aa19.33■□□□□ 0.68
CDK17-202ENST00000542666 CSRNP3Q8WYN3 585 aa19.32■□□□□ 0.68
CDK17-202ENST00000542666 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
CDK17-202ENST00000542666 KIF27Q86VH2 1401 aa19.27■□□□□ 0.68
CDK17-202ENST00000542666 ERCC6Q03468 1493 aa19.27■□□□□ 0.67
CDK17-202ENST00000542666 CUX2O14529 1486 aa19.26■□□□□ 0.67
CDK17-202ENST00000542666 WDR62O43379 1518 aa19.26■□□□□ 0.67
CDK17-202ENST00000542666 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
CDK17-202ENST00000542666 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
CDK17-202ENST00000542666 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
CDK17-202ENST00000542666 WDR97A6NE52 1622 aa19.24■□□□□ 0.67
CDK17-202ENST00000542666 KIF21BO75037 1637 aa19.23■□□□□ 0.67
CDK17-202ENST00000542666 TARBP1Q13395 1621 aaKnown RBP19.19■□□□□ 0.66
CDK17-202ENST00000542666 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
CDK17-202ENST00000542666 PRXQ9BXM0 1461 aa19.17■□□□□ 0.66
CDK17-202ENST00000542666 IGF1RP08069 1367 aa19.14■□□□□ 0.66
CDK17-202ENST00000542666 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.65
CDK17-202ENST00000542666 ABCA5Q8WWZ7 1642 aa19.13■□□□□ 0.65
CDK17-202ENST00000542666 ERICH3Q5RHP9 1530 aa19.11■□□□□ 0.65
CDK17-202ENST00000542666 TNIKQ9UKE5 1360 aa19.1■□□□□ 0.65
CDK17-202ENST00000542666 TDRD9Q8NDG6 1382 aaKnown RBP19.08■□□□□ 0.65
CDK17-202ENST00000542666 IFT140Q96RY7 1462 aa19.07■□□□□ 0.64
CDK17-202ENST00000542666 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
CDK17-202ENST00000542666 UBTFP17480 764 aaKnown RBP19.04■□□□□ 0.64
CDK17-202ENST00000542666 CARMIL1Q5VZK9 1371 aa19.02■□□□□ 0.64
CDK17-202ENST00000542666 ZNF608Q9ULD9 1512 aaPredicted RBP19.01■□□□□ 0.63
CDK17-202ENST00000542666 CEP162Q5TB80 1403 aa19■□□□□ 0.63
CDK17-202ENST00000542666 CUL7Q14999 1698 aa19■□□□□ 0.63
CDK17-202ENST00000542666 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.637e-7■■■■■ 39.8
CDK17-202ENST00000542666 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
CDK17-202ENST00000542666 EIF4G3O43432 1585 aaKnown RBP18.94■□□□□ 0.62
CDK17-202ENST00000542666 GRIN2BQ13224 1484 aa18.91■□□□□ 0.62
CDK17-202ENST00000542666 ADAMTS12P58397 1594 aa18.88■□□□□ 0.61
CDK17-202ENST00000542666 CLIP1P30622 1438 aa18.86■□□□□ 0.61
CDK17-202ENST00000542666 FHAD1B1AJZ9 1412 aa18.84■□□□□ 0.61
CDK17-202ENST00000542666 SNAPC4Q5SXM2 1469 aa18.82■□□□□ 0.6
CDK17-202ENST00000542666 CTTNBP2Q8WZ74 1663 aa18.79■□□□□ 0.6
CDK17-202ENST00000542666 MAGI1Q96QZ7 1491 aaPredicted RBP18.76■□□□□ 0.59
CDK17-202ENST00000542666 RANGAP1P46060 587 aaPredicted RBP18.76■□□□□ 0.59
CDK17-202ENST00000542666 ARAP1Q96P48 1450 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms