Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CNOT4O95628 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT4O95628 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.69■■□□□ 1.06
CNOT4O95628 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT4O95628 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CNOT4O95628 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.69■■□□□ 1.06
CNOT4O95628 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT4O95628 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT4O95628 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CNOT4O95628 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.68■■□□□ 1.06
CNOT4O95628 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CNOT4O95628 AL359504.2-201ENST00000605506 1601 ntBASIC21.68■■□□□ 1.06
CNOT4O95628 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
CNOT4O95628 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.67■■□□□ 1.06
CNOT4O95628 AL449106.1-201ENST00000608517 1980 ntBASIC21.67■■□□□ 1.06
CNOT4O95628 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.67■■□□□ 1.06
CNOT4O95628 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
CNOT4O95628 RP9P-202ENST00000450133 1212 ntBASIC21.67■■□□□ 1.06
CNOT4O95628 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT4O95628 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
CNOT4O95628 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT4O95628 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT4O95628 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT4O95628 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.66■■□□□ 1.06
CNOT4O95628 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT4O95628 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT4O95628 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT4O95628 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT4O95628 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.65■■□□□ 1.06
CNOT4O95628 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CNOT4O95628 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT4O95628 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.65■■□□□ 1.06
CNOT4O95628 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT4O95628 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CNOT4O95628 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT4O95628 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CNOT4O95628 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
CNOT4O95628 AL033527.3-201ENST00000566366 1196 ntBASIC21.64■■□□□ 1.05
CNOT4O95628 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT4O95628 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT4O95628 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CNOT4O95628 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CNOT4O95628 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT4O95628 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CNOT4O95628 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.63■■□□□ 1.05
CNOT4O95628 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT4O95628 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT4O95628 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CNOT4O95628 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.63■■□□□ 1.05
CNOT4O95628 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT4O95628 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT4O95628 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.62■■□□□ 1.05
CNOT4O95628 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.62■■□□□ 1.05
CNOT4O95628 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT4O95628 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT4O95628 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT4O95628 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNOT4O95628 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNOT4O95628 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNOT4O95628 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.61■■□□□ 1.05
CNOT4O95628 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.61■■□□□ 1.05
CNOT4O95628 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CNOT4O95628 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CNOT4O95628 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT4O95628 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT4O95628 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT4O95628 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CNOT4O95628 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CNOT4O95628 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CNOT4O95628 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CNOT4O95628 AC093536.1-201ENST00000569153 554 ntBASIC21.59■■□□□ 1.05
CNOT4O95628 AC026202.3-201ENST00000600805 1127 ntBASIC21.59■■□□□ 1.05
CNOT4O95628 U85056.1-201ENST00000616429 682 ntBASIC21.59■■□□□ 1.05
CNOT4O95628 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNOT4O95628 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.59■■□□□ 1.05
CNOT4O95628 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CNOT4O95628 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CNOT4O95628 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CNOT4O95628 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.58■■□□□ 1.05
CNOT4O95628 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNOT4O95628 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
CNOT4O95628 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CNOT4O95628 AC133552.2-201ENST00000619106 1032 ntBASIC21.57■■□□□ 1.04
CNOT4O95628 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CNOT4O95628 AC142472.1-201ENST00000612013 1741 ntBASIC21.57■■□□□ 1.04
CNOT4O95628 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT4O95628 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CNOT4O95628 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CNOT4O95628 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT4O95628 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.56■■□□□ 1.04
CNOT4O95628 RAP2CP1-202ENST00000605179 643 ntBASIC21.56■■□□□ 1.04
CNOT4O95628 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.56■■□□□ 1.04
CNOT4O95628 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CNOT4O95628 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT4O95628 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT4O95628 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CNOT4O95628 AC009831.1-201ENST00000580420 1582 ntBASIC21.55■■□□□ 1.04
CNOT4O95628 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CNOT4O95628 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CNOT4O95628 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms