Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TRBV6-4A0A1B0GX49 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 AC092803.2-201ENST00000564287 1899 ntBASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRBV6-4A0A1B0GX49 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-4A0A1B0GX49 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRBV6-4A0A1B0GX49 AL359258.2-201ENST00000564063 1566 ntBASIC17.3■□□□□ 0.36
TRBV6-4A0A1B0GX49 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
TRBV6-4A0A1B0GX49 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.29■□□□□ 0.36
TRBV6-4A0A1B0GX49 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-4A0A1B0GX49 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-4A0A1B0GX49 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TRBV6-4A0A1B0GX49 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TRBV6-4A0A1B0GX49 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-4A0A1B0GX49 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-4A0A1B0GX49 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRBV6-4A0A1B0GX49 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 AC016575.1-201ENST00000607026 382 ntBASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC17.28■□□□□ 0.36
TRBV6-4A0A1B0GX49 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-4A0A1B0GX49 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV6-4A0A1B0GX49 DUSP8P4-201ENST00000399538 1761 ntBASIC17.27■□□□□ 0.35
TRBV6-4A0A1B0GX49 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV6-4A0A1B0GX49 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV6-4A0A1B0GX49 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV6-4A0A1B0GX49 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV6-4A0A1B0GX49 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV6-4A0A1B0GX49 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-4A0A1B0GX49 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-4A0A1B0GX49 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV6-4A0A1B0GX49 MIR7108-201ENST00000614319 87 ntBASIC17.25■□□□□ 0.35
TRBV6-4A0A1B0GX49 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV6-4A0A1B0GX49 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV6-4A0A1B0GX49 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-4A0A1B0GX49 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-4A0A1B0GX49 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRBV6-4A0A1B0GX49 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRBV6-4A0A1B0GX49 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.24■□□□□ 0.35
TRBV6-4A0A1B0GX49 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC17.23■□□□□ 0.35
TRBV6-4A0A1B0GX49 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.23■□□□□ 0.35
TRBV6-4A0A1B0GX49 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TRBV6-4A0A1B0GX49 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.23■□□□□ 0.35
TRBV6-4A0A1B0GX49 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-4A0A1B0GX49 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRBV6-4A0A1B0GX49 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRBV6-4A0A1B0GX49 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-4A0A1B0GX49 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-4A0A1B0GX49 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-4A0A1B0GX49 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRBV6-4A0A1B0GX49 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
TRBV6-4A0A1B0GX49 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV6-4A0A1B0GX49 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV6-4A0A1B0GX49 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
TRBV6-4A0A1B0GX49 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV6-4A0A1B0GX49 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV6-4A0A1B0GX49 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 AL359504.2-201ENST00000605506 1601 ntBASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRBV6-4A0A1B0GX49 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRBV6-4A0A1B0GX49 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-4A0A1B0GX49 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV6-4A0A1B0GX49 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms