Protein–RNA interactions for Protein: Q8WTV0

SCARB1, Scavenger receptor class B member 1, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1Q8WTV0 AC010864.1-201ENST00000609407 1511 ntBASIC20.56■□□□□ 0.88
SCARB1Q8WTV0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCARB1Q8WTV0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SCARB1Q8WTV0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 AC079834.2-201ENST00000609776 1949 ntBASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SCARB1Q8WTV0 ERN1-208ENST00000606895 2068 ntBASIC20.54■□□□□ 0.88
SCARB1Q8WTV0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SCARB1Q8WTV0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCARB1Q8WTV0 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SCARB1Q8WTV0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SCARB1Q8WTV0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.53■□□□□ 0.88
SCARB1Q8WTV0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCARB1Q8WTV0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SCARB1Q8WTV0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.53■□□□□ 0.88
SCARB1Q8WTV0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCARB1Q8WTV0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SCARB1Q8WTV0 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCARB1Q8WTV0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCARB1Q8WTV0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.52■□□□□ 0.88
SCARB1Q8WTV0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SCARB1Q8WTV0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SCARB1Q8WTV0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCARB1Q8WTV0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SCARB1Q8WTV0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCARB1Q8WTV0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SCARB1Q8WTV0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCARB1Q8WTV0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCARB1Q8WTV0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCARB1Q8WTV0 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCARB1Q8WTV0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.5■□□□□ 0.87
SCARB1Q8WTV0 AP004833.2-201ENST00000532228 1454 ntBASIC20.5■□□□□ 0.87
SCARB1Q8WTV0 CLDN5-201ENST00000403084 2357 ntBASIC20.49■□□□□ 0.87
SCARB1Q8WTV0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCARB1Q8WTV0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.49■□□□□ 0.87
SCARB1Q8WTV0 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCARB1Q8WTV0 AC092803.2-201ENST00000564287 1899 ntBASIC20.49■□□□□ 0.87
SCARB1Q8WTV0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCARB1Q8WTV0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCARB1Q8WTV0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCARB1Q8WTV0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCARB1Q8WTV0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SCARB1Q8WTV0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCARB1Q8WTV0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.48■□□□□ 0.87
SCARB1Q8WTV0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCARB1Q8WTV0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.47■□□□□ 0.87
SCARB1Q8WTV0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
SCARB1Q8WTV0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCARB1Q8WTV0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.46■□□□□ 0.87
SCARB1Q8WTV0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCARB1Q8WTV0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCARB1Q8WTV0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.46■□□□□ 0.87
SCARB1Q8WTV0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SCARB1Q8WTV0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
SCARB1Q8WTV0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SCARB1Q8WTV0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.44■□□□□ 0.86
SCARB1Q8WTV0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCARB1Q8WTV0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SCARB1Q8WTV0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.44■□□□□ 0.86
SCARB1Q8WTV0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SCARB1Q8WTV0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.44■□□□□ 0.86
SCARB1Q8WTV0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCARB1Q8WTV0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCARB1Q8WTV0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SCARB1Q8WTV0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SCARB1Q8WTV0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.42■□□□□ 0.86
SCARB1Q8WTV0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SCARB1Q8WTV0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SCARB1Q8WTV0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
SCARB1Q8WTV0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SCARB1Q8WTV0 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SCARB1Q8WTV0 AC068473.5-201ENST00000616428 2072 ntBASIC20.41■□□□□ 0.86
SCARB1Q8WTV0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.41■□□□□ 0.86
SCARB1Q8WTV0 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.41■□□□□ 0.86
SCARB1Q8WTV0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCARB1Q8WTV0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SCARB1Q8WTV0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SCARB1Q8WTV0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCARB1Q8WTV0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCARB1Q8WTV0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SCARB1Q8WTV0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCARB1Q8WTV0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SCARB1Q8WTV0 MIR762-201ENST00000390236 83 ntBASIC20.39■□□□□ 0.85
SCARB1Q8WTV0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.39■□□□□ 0.85
SCARB1Q8WTV0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms