Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
ZNF546Q86UE3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ZNF546Q86UE3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
ZNF546Q86UE3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.44■□□□□ 0.86
ZNF546Q86UE3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ZNF546Q86UE3 AC127502.1-201ENST00000399971 1502 ntBASIC20.43■□□□□ 0.86
ZNF546Q86UE3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZNF546Q86UE3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF546Q86UE3 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
ZNF546Q86UE3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZNF546Q86UE3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF546Q86UE3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF546Q86UE3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF546Q86UE3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF546Q86UE3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ZNF546Q86UE3 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.4■□□□□ 0.86
ZNF546Q86UE3 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.4■□□□□ 0.86
ZNF546Q86UE3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF546Q86UE3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
ZNF546Q86UE3 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF546Q86UE3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF546Q86UE3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ZNF546Q86UE3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF546Q86UE3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF546Q86UE3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF546Q86UE3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF546Q86UE3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF546Q86UE3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF546Q86UE3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZNF546Q86UE3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF546Q86UE3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZNF546Q86UE3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF546Q86UE3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
ZNF546Q86UE3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF546Q86UE3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZNF546Q86UE3 AC018358.1-201ENST00000631079 1402 ntBASIC20.37■□□□□ 0.85
ZNF546Q86UE3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF546Q86UE3 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF546Q86UE3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
ZNF546Q86UE3 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.37■□□□□ 0.85
ZNF546Q86UE3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.37■□□□□ 0.85
ZNF546Q86UE3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF546Q86UE3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.36■□□□□ 0.85
ZNF546Q86UE3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
ZNF546Q86UE3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF546Q86UE3 AC142381.3-201ENST00000568208 1670 ntBASIC20.36■□□□□ 0.85
ZNF546Q86UE3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ZNF546Q86UE3 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.36■□□□□ 0.85
ZNF546Q86UE3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF546Q86UE3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF546Q86UE3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF546Q86UE3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZNF546Q86UE3 AL133380.1-201ENST00000506013 324 ntBASIC20.35■□□□□ 0.85
ZNF546Q86UE3 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.35■□□□□ 0.85
ZNF546Q86UE3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF546Q86UE3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF546Q86UE3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF546Q86UE3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ZNF546Q86UE3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF546Q86UE3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF546Q86UE3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF546Q86UE3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF546Q86UE3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.33■□□□□ 0.85
ZNF546Q86UE3 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF546Q86UE3 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF546Q86UE3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF546Q86UE3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
ZNF546Q86UE3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF546Q86UE3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZNF546Q86UE3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF546Q86UE3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF546Q86UE3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF546Q86UE3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF546Q86UE3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF546Q86UE3 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF546Q86UE3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF546Q86UE3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF546Q86UE3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZNF546Q86UE3 AL139125.2-201ENST00000623134 1869 ntBASIC20.3■□□□□ 0.84
ZNF546Q86UE3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms