Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PVT1_1.1-201ENST00000615125 194 ntBASIC21.01■□□□□ 0.95
VPS13CQ709C8 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VPS13CQ709C8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.01■□□□□ 0.95
VPS13CQ709C8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS13CQ709C8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.01■□□□□ 0.95
VPS13CQ709C8 AL359258.2-201ENST00000564063 1566 ntBASIC21.01■□□□□ 0.95
VPS13CQ709C8 MIR4508-201ENST00000584178 70 ntBASIC21■□□□□ 0.95
VPS13CQ709C8 ST7-AS1-201ENST00000456775 1889 ntBASIC21■□□□□ 0.95
VPS13CQ709C8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS13CQ709C8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VPS13CQ709C8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
VPS13CQ709C8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.99■□□□□ 0.95
VPS13CQ709C8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.99■□□□□ 0.95
VPS13CQ709C8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
VPS13CQ709C8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VPS13CQ709C8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
VPS13CQ709C8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
VPS13CQ709C8 MIR6765-201ENST00000614092 87 ntBASIC20.98■□□□□ 0.95
VPS13CQ709C8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS13CQ709C8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS13CQ709C8 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.98■□□□□ 0.95
VPS13CQ709C8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
VPS13CQ709C8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
VPS13CQ709C8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VPS13CQ709C8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VPS13CQ709C8 AC139795.1-202ENST00000500444 432 ntBASIC20.96■□□□□ 0.95
VPS13CQ709C8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
VPS13CQ709C8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
VPS13CQ709C8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS13CQ709C8 AC239859.2-201ENST00000444165 318 ntBASIC20.95■□□□□ 0.94
VPS13CQ709C8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS13CQ709C8 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.95■□□□□ 0.94
VPS13CQ709C8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS13CQ709C8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.95■□□□□ 0.94
VPS13CQ709C8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VPS13CQ709C8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
VPS13CQ709C8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.94■□□□□ 0.94
VPS13CQ709C8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS13CQ709C8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS13CQ709C8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS13CQ709C8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS13CQ709C8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.94■□□□□ 0.94
VPS13CQ709C8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS13CQ709C8 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS13CQ709C8 AL356441.2-201ENST00000443009 864 ntBASIC20.93■□□□□ 0.94
VPS13CQ709C8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.93■□□□□ 0.94
VPS13CQ709C8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS13CQ709C8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS13CQ709C8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS13CQ709C8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VPS13CQ709C8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS13CQ709C8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS13CQ709C8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS13CQ709C8 Z92544.1-202ENST00000571933 1220 ntBASIC20.91■□□□□ 0.94
VPS13CQ709C8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
VPS13CQ709C8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS13CQ709C8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.91■□□□□ 0.94
VPS13CQ709C8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VPS13CQ709C8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS13CQ709C8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.9■□□□□ 0.94
VPS13CQ709C8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS13CQ709C8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS13CQ709C8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VPS13CQ709C8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VPS13CQ709C8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS13CQ709C8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS13CQ709C8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS13CQ709C8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.89■□□□□ 0.93
VPS13CQ709C8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS13CQ709C8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.89■□□□□ 0.93
VPS13CQ709C8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS13CQ709C8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS13CQ709C8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS13CQ709C8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS13CQ709C8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS13CQ709C8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS13CQ709C8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
VPS13CQ709C8 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS13CQ709C8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS13CQ709C8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.88■□□□□ 0.93
VPS13CQ709C8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS13CQ709C8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.87■□□□□ 0.93
VPS13CQ709C8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS13CQ709C8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VPS13CQ709C8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS13CQ709C8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
VPS13CQ709C8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS13CQ709C8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.86■□□□□ 0.93
VPS13CQ709C8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS13CQ709C8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS13CQ709C8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS13CQ709C8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS13CQ709C8 AC093536.1-201ENST00000569153 554 ntBASIC20.85■□□□□ 0.93
VPS13CQ709C8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VPS13CQ709C8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
VPS13CQ709C8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS13CQ709C8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS13CQ709C8 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.84■□□□□ 0.93
VPS13CQ709C8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS13CQ709C8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms