Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC103724.3-201ENST00000564481 992 ntBASIC17.01■□□□□ 0.31
VPS13DQ5THJ4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13DQ5THJ4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.01■□□□□ 0.31
VPS13DQ5THJ4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS13DQ5THJ4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
VPS13DQ5THJ4 THA1P-201ENST00000590384 1145 ntBASIC17.01■□□□□ 0.31
VPS13DQ5THJ4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS13DQ5THJ4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VPS13DQ5THJ4 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS13DQ5THJ4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC17■□□□□ 0.31
VPS13DQ5THJ4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS13DQ5THJ4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17■□□□□ 0.31
VPS13DQ5THJ4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 BHLHE23-202ENST00000612929 1109 ntBASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS13DQ5THJ4 AC139795.1-202ENST00000500444 432 ntBASIC16.98■□□□□ 0.31
VPS13DQ5THJ4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS13DQ5THJ4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS13DQ5THJ4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS13DQ5THJ4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS13DQ5THJ4 AC093536.1-201ENST00000569153 554 ntBASIC16.97■□□□□ 0.31
VPS13DQ5THJ4 AP004833.2-201ENST00000532228 1454 ntBASIC16.97■□□□□ 0.31
VPS13DQ5THJ4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS13DQ5THJ4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS13DQ5THJ4 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC16.97■□□□□ 0.31
VPS13DQ5THJ4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS13DQ5THJ4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS13DQ5THJ4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 MIR4508-201ENST00000584178 70 ntBASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 HES6-204ENST00000409182 863 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 MIR3960-201ENST00000583311 91 ntBASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VPS13DQ5THJ4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.96■□□□□ 0.3
VPS13DQ5THJ4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS13DQ5THJ4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS13DQ5THJ4 AC074183.2-201ENST00000623112 922 ntBASIC16.95■□□□□ 0.3
VPS13DQ5THJ4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS13DQ5THJ4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS13DQ5THJ4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS13DQ5THJ4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VPS13DQ5THJ4 MIR6765-201ENST00000614092 87 ntBASIC16.94■□□□□ 0.3
VPS13DQ5THJ4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.94■□□□□ 0.3
VPS13DQ5THJ4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VPS13DQ5THJ4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.94■□□□□ 0.3
VPS13DQ5THJ4 GUSBP5-201ENST00000418136 578 ntBASIC16.94■□□□□ 0.3
VPS13DQ5THJ4 AL139393.2-201ENST00000608721 2025 ntBASIC16.93■□□□□ 0.3
VPS13DQ5THJ4 ABCB10P3-201ENST00000561950 2166 ntBASIC16.93■□□□□ 0.3
VPS13DQ5THJ4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VPS13DQ5THJ4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC16.93■□□□□ 0.3
VPS13DQ5THJ4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS13DQ5THJ4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13DQ5THJ4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.92■□□□□ 0.3
VPS13DQ5THJ4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS13DQ5THJ4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS13DQ5THJ4 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13DQ5THJ4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VPS13DQ5THJ4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS13DQ5THJ4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS13DQ5THJ4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS13DQ5THJ4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 AC018755.3-202ENST00000596210 929 ntBASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS13DQ5THJ4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.89■□□□□ 0.3
VPS13DQ5THJ4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.89■□□□□ 0.3
VPS13DQ5THJ4 AP002414.2-202ENST00000590929 1450 ntBASIC16.89■□□□□ 0.29
VPS13DQ5THJ4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC16.89■□□□□ 0.29
VPS13DQ5THJ4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VPS13DQ5THJ4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.89■□□□□ 0.29
VPS13DQ5THJ4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS13DQ5THJ4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 AL356441.2-201ENST00000443009 864 ntBASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.88■□□□□ 0.29
VPS13DQ5THJ4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 125.9 ms