Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 DLD1YDL174C 1764 nt10.55□□□□□ -0.72
RKR1Q04781 ADE2YOR128C 1716 nt10.55□□□□□ -0.72
RKR1Q04781 HIS1YER055C 894 nt10.55□□□□□ -0.72
RKR1Q04781 EGD2YHR193C 525 nt10.55□□□□□ -0.72
RKR1Q04781 SNN1YNL086W 309 nt10.55□□□□□ -0.72
RKR1Q04781 DON1YDR273W 1098 nt10.54□□□□□ -0.72
RKR1Q04781 YHR213W-BYHR213W-B 300 nt10.54□□□□□ -0.72
RKR1Q04781 YAR064WYAR064W 300 nt10.54□□□□□ -0.72
RKR1Q04781 YMR279CYMR279C 1623 nt10.54□□□□□ -0.72
RKR1Q04781 DOT1YDR440W 1749 nt10.54□□□□□ -0.72
RKR1Q04781 FRA1YLL029W 2250 nt10.53□□□□□ -0.72
RKR1Q04781 YRB2YIL063C 984 nt10.52□□□□□ -0.72
RKR1Q04781 MRPL10YNL284C 969 nt10.52□□□□□ -0.73
RKR1Q04781 MDH2YOL126C 1134 nt10.51□□□□□ -0.73
RKR1Q04781 ERP5YHR110W 639 nt10.5□□□□□ -0.73
RKR1Q04781 SUR7YML052W 909 nt10.5□□□□□ -0.73
RKR1Q04781 YPR196WYPR196W 1413 nt10.5□□□□□ -0.73
RKR1Q04781 YDL172CYDL172C 480 nt10.49□□□□□ -0.73
RKR1Q04781 SYF2YGR129W 648 nt10.49□□□□□ -0.73
RKR1Q04781 UIP5YKR044W 1332 nt10.49□□□□□ -0.73
RKR1Q04781 YEL034C-AYEL034C-A 603 nt10.48□□□□□ -0.73
RKR1Q04781 DSF1YEL070W 1509 nt10.48□□□□□ -0.73
RKR1Q04781 YNR073CYNR073C 1509 nt10.48□□□□□ -0.73
RKR1Q04781 SGF29YCL010C 780 nt10.47□□□□□ -0.73
RKR1Q04781 EXG2YDR261C 1689 nt10.46□□□□□ -0.73
RKR1Q04781 PMT7YDR307W 1989 nt10.46□□□□□ -0.73
RKR1Q04781 IRC5YFR038W 2562 nt10.45□□□□□ -0.74
RKR1Q04781 CBR1YIL043C 855 nt10.45□□□□□ -0.74
RKR1Q04781 SWD1YAR003W 1281 nt10.45□□□□□ -0.74
RKR1Q04781 MSG5YNL053W 1470 nt10.45□□□□□ -0.74
RKR1Q04781 SPT3YDR392W 1014 nt10.44□□□□□ -0.74
RKR1Q04781 MPC2YHR162W 390 nt10.44□□□□□ -0.74
RKR1Q04781 SKG1YKR100C 1068 nt10.44□□□□□ -0.74
RKR1Q04781 YNL200CYNL200C 741 nt10.44□□□□□ -0.74
RKR1Q04781 GNA1YFL017C 480 nt10.43□□□□□ -0.74
RKR1Q04781 HSV2YGR223C 1347 nt10.43□□□□□ -0.74
RKR1Q04781 NUP57YGR119C 1626 nt10.43□□□□□ -0.74
RKR1Q04781 VPS24YKL041W 675 nt10.43□□□□□ -0.74
RKR1Q04781 HVG1YER039C 750 nt10.42□□□□□ -0.74
RKR1Q04781 PHO85YPL031C 918 nt10.42□□□□□ -0.74
RKR1Q04781 CDC23YHR166C 1881 nt10.42□□□□□ -0.74
RKR1Q04781 MSO1YNR049C 633 nt10.41□□□□□ -0.74
RKR1Q04781 RDN37-1RDN37-1 5354 nt10.41□□□□□ -0.74
RKR1Q04781 RDN37-2RDN37-2 5354 nt10.41□□□□□ -0.74
RKR1Q04781 YHK8YHR048W 1545 nt10.4□□□□□ -0.74
RKR1Q04781 YOR041CYOR041C 432 nt10.4□□□□□ -0.74
RKR1Q04781 YPR127WYPR127W 1038 nt10.39□□□□□ -0.75
RKR1Q04781 YHR213W-AYHR213W-A 234 nt10.38□□□□□ -0.75
RKR1Q04781 MTF2YDL044C 1323 nt10.37□□□□□ -0.75
RKR1Q04781 YMR034CYMR034C 1305 nt10.37□□□□□ -0.75
RKR1Q04781 COQ1YBR003W 1422 nt10.36□□□□□ -0.75
RKR1Q04781 YSC83YHR017W 1158 nt10.36□□□□□ -0.75
RKR1Q04781 ZRT2YLR130C 1269 nt10.36□□□□□ -0.75
RKR1Q04781 GON7YJL184W 372 nt10.35□□□□□ -0.75
RKR1Q04781 FCY2YER056C 1602 nt10.35□□□□□ -0.75
RKR1Q04781 PRY3YJL078C 2646 nt10.35□□□□□ -0.75
RKR1Q04781 MRPS28YDR337W 861 nt10.34□□□□□ -0.75
RKR1Q04781 FCP1YMR277W 2199 nt10.33□□□□□ -0.76
RKR1Q04781 PPH22YDL188C 1134 nt10.32□□□□□ -0.76
RKR1Q04781 RSC30YHR056C 2652 nt10.32□□□□□ -0.76
RKR1Q04781 DID2YKR035W-A 615 nt10.32□□□□□ -0.76
RKR1Q04781 MRPS12YNR036C 462 nt10.32□□□□□ -0.76
RKR1Q04781 YBR056C-BYBR056C-B 159 nt10.32□□□□□ -0.76
RKR1Q04781 AMN1YBR158W 1650 nt10.31□□□□□ -0.76
RKR1Q04781 SDH4YDR178W 546 nt10.31□□□□□ -0.76
RKR1Q04781 PSR2YLR019W 1194 nt10.31□□□□□ -0.76
RKR1Q04781 ECM19YLR390W 339 nt10.31□□□□□ -0.76
RKR1Q04781 CCT8YJL008C 1707 nt10.3□□□□□ -0.76
RKR1Q04781 YDL218WYDL218W 954 nt10.3□□□□□ -0.76
RKR1Q04781 URH1YDR400W 1023 nt10.29□□□□□ -0.76
RKR1Q04781 ATP10YLR393W 840 nt10.29□□□□□ -0.76
RKR1Q04781 PTC3YBL056W 1407 nt10.29□□□□□ -0.76
RKR1Q04781 RPL10YLR075W 666 nt10.28□□□□□ -0.76
RKR1Q04781 SCS7YMR272C 1155 nt10.28□□□□□ -0.76
RKR1Q04781 MLS1YNL117W 1665 nt10.28□□□□□ -0.76
RKR1Q04781 ERG1YGR175C 1491 nt10.27□□□□□ -0.77
RKR1Q04781 SIT4YDL047W 936 nt10.26□□□□□ -0.77
RKR1Q04781 PPM2YOL141W 2088 nt10.26□□□□□ -0.77
RKR1Q04781 YNL017CYNL017C 339 nt10.26□□□□□ -0.77
RKR1Q04781 RPN11YFR004W 921 nt10.25□□□□□ -0.77
RKR1Q04781 MEX67YPL169C 1800 nt10.24□□□□□ -0.77
RKR1Q04781 PTC4YBR125C 1182 nt10.24□□□□□ -0.77
RKR1Q04781 MIX17YMR002W 471 nt10.23□□□□□ -0.77
RKR1Q04781 ENV7YPL236C 1095 nt10.23□□□□□ -0.77
RKR1Q04781 MAL31YBR298C 1845 nt10.23□□□□□ -0.77
RKR1Q04781 YGR054WYGR054W 1929 nt10.22□□□□□ -0.77
RKR1Q04781 HEM2YGL040C 1029 nt10.22□□□□□ -0.77
RKR1Q04781 DOT5YIL010W 648 nt10.22□□□□□ -0.77
RKR1Q04781 SHP1YBL058W 1272 nt10.22□□□□□ -0.77
RKR1Q04781 TMA46YOR091W 1038 nt10.22□□□□□ -0.77
RKR1Q04781 TRS31YDR472W 852 nt10.21□□□□□ -0.78
RKR1Q04781 YLR126CYLR126C 756 nt10.21□□□□□ -0.78
RKR1Q04781 YHR020WYHR020W 2067 nt10.21□□□□□ -0.78
RKR1Q04781 snR82snR82 268 nt10.2□□□□□ -0.78
RKR1Q04781 TIM22YDL217C 624 nt10.2□□□□□ -0.78
RKR1Q04781 TDP1YBR223C 1635 nt10.19□□□□□ -0.78
RKR1Q04781 NHA1YLR138W 2958 nt10.19□□□□□ -0.78
RKR1Q04781 CEM1YER061C 1329 nt10.19□□□□□ -0.78
RKR1Q04781 TUF1YOR187W 1314 nt10.19□□□□□ -0.78
RKR1Q04781 MTC2YKL098W 1074 nt10.18□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms