RNA–Protein interactions for RNA: RDN37-1

RDN37-1, 35S ribosomal RNA (35S rRNA) transcript, yeastyeast

Gene RDN37-1, Length 5,354 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN37-1RDN37-1 TFA1P36100 482 aa15.42■□□□□ 0.06
RDN37-1RDN37-1 RQC2Q12532 1038 aaKnown RBP15.11■□□□□ 0.01
RDN37-1RDN37-1 TAF7Q05021 590 aa15.09■□□□□ 0.01
RDN37-1RDN37-1 MNN4P36044 1178 aa14.99□□□□□ -0.01
RDN37-1RDN37-1 MTC1P47018 478 aaKnown RBP14.75□□□□□ -0.05
RDN37-1RDN37-1 DRS1P32892 752 aaKnown RBP14.44□□□□□ -0.1
RDN37-1RDN37-1 SAS10Q12136 610 aaPredicted RBP14.35□□□□□ -0.11
RDN37-1RDN37-1 SCT1P32784 759 aa14.2□□□□□ -0.14
RDN37-1RDN37-1 FPR3P38911 411 aaKnown RBP14.2□□□□□ -0.14
RDN37-1RDN37-1 AIM44Q99299 758 aa14.12□□□□□ -0.15
RDN37-1RDN37-1 ASF1P32447 279 aa14□□□□□ -0.17
RDN37-1RDN37-1 PAF1P38351 445 aa13.96□□□□□ -0.17
RDN37-1RDN37-1 POL5P39985 1022 aaKnown RBP13.95□□□□□ -0.18
RDN37-1RDN37-1 NAP1P25293 417 aaKnown RBP13.86□□□□□ -0.19
RDN37-1RDN37-1 IFH1P39520 1085 aa13.85□□□□□ -0.19
RDN37-1RDN37-1 SIS2P36024 562 aa13.84□□□□□ -0.19
RDN37-1RDN37-1 LEU3P08638 886 aa13.83□□□□□ -0.2
RDN37-1RDN37-1 NOP7P53261 605 aaKnown RBP13.83□□□□□ -0.2
RDN37-1RDN37-1 EAF7P53911 425 aaKnown RBP13.82□□□□□ -0.2
RDN37-1RDN37-1 RTT106P40161 455 aa13.76□□□□□ -0.21
RDN37-1RDN37-1 ORC1P54784 914 aaPredicted RBP13.63□□□□□ -0.23
RDN37-1RDN37-1 NOP2P40991 618 aaKnown RBP13.55□□□□□ -0.24
RDN37-1RDN37-1 RNA1P11745 407 aaKnown RBP13.51□□□□□ -0.25
RDN37-1RDN37-1 CAB3P36076 571 aa13.49□□□□□ -0.25
RDN37-1RDN37-1 LEO1P38439 464 aa13.47□□□□□ -0.25
RDN37-1RDN37-1 URN1Q06525 465 aaKnown RBP13.45□□□□□ -0.26
RDN37-1RDN37-1 KRI1P42846 591 aaKnown RBP13.43□□□□□ -0.26
RDN37-1RDN37-1 FUN12P39730 1002 aaKnown RBP13.37□□□□□ -0.27
RDN37-1RDN37-1 JIP3O13555 125 aa13.34□□□□□ -0.27
RDN37-1RDN37-1 COG8Q04632 607 aa13.3□□□□□ -0.28
RDN37-1RDN37-1 QCR6P00127 147 aa13.26□□□□□ -0.29
RDN37-1RDN37-1 NOP8Q08287 484 aaPredicted RBP13.24□□□□□ -0.29
RDN37-1RDN37-1 ENP1P38333 483 aaKnown RBP13.22□□□□□ -0.29
RDN37-1RDN37-1 CKB1P43639 278 aa13.21□□□□□ -0.29
RDN37-1RDN37-1 PAP2P53632 584 aaKnown RBP13.18□□□□□ -0.3
RDN37-1RDN37-1 SPA2P23201 1466 aaKnown RBP13.18□□□□□ -0.3
RDN37-1RDN37-1 ESC2Q06340 456 aa13.15□□□□□ -0.3
RDN37-1RDN37-1 MRX12P47084 519 aa13.03□□□□□ -0.32
RDN37-1RDN37-1 YRB30P53107 440 aaPredicted RBP13□□□□□ -0.33
RDN37-1RDN37-1 BUD21Q08492 214 aaPredicted RBP12.98□□□□□ -0.33
RDN37-1RDN37-1 SVF1Q05515 481 aa12.96□□□□□ -0.33
RDN37-1RDN37-1 YFR016CP43597 1233 aaKnown RBP12.95□□□□□ -0.34
RDN37-1RDN37-1 ENP2P48234 707 aaKnown RBP12.93□□□□□ -0.34
RDN37-1RDN37-1 BFR2Q06631 534 aaKnown RBP12.92□□□□□ -0.34
RDN37-1RDN37-1 YGL081WP53156 320 aa12.85□□□□□ -0.35
RDN37-1RDN37-1 NMD2P38798 1089 aaKnown RBP12.85□□□□□ -0.35
RDN37-1RDN37-1 TPM1P17536 199 aaKnown RBP12.83□□□□□ -0.36
RDN37-1RDN37-1 RAD2P07276 1031 aa12.81□□□□□ -0.36
RDN37-1RDN37-1 SEC3P33332 1336 aaKnown RBP12.8□□□□□ -0.36
RDN37-1RDN37-1 CBF5P33322 483 aaKnown RBP RIP-Chip data12.77□□□□□ -0.37not detected
RDN37-1RDN37-1 YJL181WP46987 611 aa12.74□□□□□ -0.37
RDN37-1RDN37-1 RTF1P53064 558 aa12.74□□□□□ -0.37
RDN37-1RDN37-1 SUP35P05453 685 aaKnown RBP12.74□□□□□ -0.37
RDN37-1RDN37-1 NSR1P27476 414 aaKnown RBP RIP-Chip data12.73□□□□□ -0.37not detected
RDN37-1RDN37-1 BTN2P53286 410 aa12.72□□□□□ -0.37
RDN37-1RDN37-1 EBP2P36049 427 aaKnown RBP12.72□□□□□ -0.37
RDN37-1RDN37-1 SEN54Q02825 467 aaPredicted RBP12.71□□□□□ -0.37
RDN37-1RDN37-1 YPR148CQ06523 435 aa12.71□□□□□ -0.38
RDN37-1RDN37-1 FPR4Q06205 392 aaPredicted RBP12.7□□□□□ -0.38
RDN37-1RDN37-1 TAF2P23255 1407 aa12.7□□□□□ -0.38
RDN37-1RDN37-1 ARP5P53946 755 aa12.69□□□□□ -0.38
RDN37-1RDN37-1 BDP1P46678 594 aa12.66□□□□□ -0.38
RDN37-1RDN37-1 KAR2P16474 682 aaKnown RBP12.66□□□□□ -0.38
RDN37-1RDN37-1 CLB5P30283 435 aa12.66□□□□□ -0.38
RDN37-1RDN37-1 NAB3P38996 802 aaKnown RBP RIP-Chip data12.66□□□□□ -0.38not detected
RDN37-1RDN37-1 PKH1Q03407 766 aa12.66□□□□□ -0.38
RDN37-1RDN37-1 MAK21Q12176 1025 aaKnown RBP12.63□□□□□ -0.39
RDN37-1RDN37-1 RRP8P38961 392 aaKnown RBP12.63□□□□□ -0.39
RDN37-1RDN37-1 SGS1P35187 1447 aa12.63□□□□□ -0.39
RDN37-1RDN37-1 MFT1P33441 392 aaKnown RBP12.62□□□□□ -0.39
RDN37-1RDN37-1 PSH1Q12161 406 aa12.61□□□□□ -0.39
RDN37-1RDN37-1 NCB2Q92317 146 aa12.61□□□□□ -0.39
RDN37-1RDN37-1 HSP82P02829 709 aaKnown RBP12.61□□□□□ -0.39
RDN37-1RDN37-1 TAF5P38129 798 aa12.6□□□□□ -0.39
RDN37-1RDN37-1 PEX14P53112 341 aa12.6□□□□□ -0.39
RDN37-1RDN37-1 RAD26P40352 1085 aa12.59□□□□□ -0.39
RDN37-1RDN37-1 SLD2P34252 453 aa12.58□□□□□ -0.39
RDN37-1RDN37-1 SSA2P10592 639 aaKnown RBP12.58□□□□□ -0.4
RDN37-1RDN37-1 RPC31P17890 251 aa12.58□□□□□ -0.4
RDN37-1RDN37-1 ESF1Q06344 628 aaKnown RBP12.58□□□□□ -0.4
RDN37-1RDN37-1 HUL5P53119 910 aa12.53□□□□□ -0.4
RDN37-1RDN37-1 MIC60P36112 540 aa12.52□□□□□ -0.4
RDN37-1RDN37-1 NST1P53935 1240 aa12.52□□□□□ -0.41
RDN37-1RDN37-1 SMC1P32908 1225 aa12.52□□□□□ -0.41
RDN37-1RDN37-1 KEX1P09620 729 aa12.51□□□□□ -0.41
RDN37-1RDN37-1 GLE1Q12315 538 aa12.51□□□□□ -0.41
RDN37-1RDN37-1 CDC11P32458 415 aa12.49□□□□□ -0.41
RDN37-1RDN37-1 YTA7P40340 1379 aa12.49□□□□□ -0.41
RDN37-1RDN37-1 SPT5P27692 1063 aaKnown RBP12.48□□□□□ -0.41
RDN37-1RDN37-1 INO80P53115 1489 aa12.48□□□□□ -0.41
RDN37-1RDN37-1 YMR124WP39523 943 aaKnown RBP12.48□□□□□ -0.41
RDN37-1RDN37-1 NBL1Q3E7Y6 73 aa12.48□□□□□ -0.41
RDN37-1RDN37-1 SPB4P25808 606 aaPredicted RBP12.47□□□□□ -0.41
RDN37-1RDN37-1 RIX1P38883 763 aaPredicted RBP12.47□□□□□ -0.41
RDN37-1RDN37-1 RSE1Q04693 1361 aaKnown RBP12.47□□□□□ -0.41
RDN37-1RDN37-1 ISW2Q08773 1120 aa12.46□□□□□ -0.41
RDN37-1RDN37-1 ECM16Q04217 1267 aaKnown RBP12.46□□□□□ -0.42
RDN37-1RDN37-1 SQT1P35184 431 aa12.45□□□□□ -0.42
RDN37-1RDN37-1 SKI3P17883 1432 aaKnown RBP12.45□□□□□ -0.42
RDN37-1RDN37-1 RTR1P40084 226 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms