Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 tE(CUC)DtE(CUC)D 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 tE(CUC)ItE(CUC)I 72 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 YDR467CYDR467C 327 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 VRG4YGL225W 1014 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 YLR307C-AYLR307C-A 264 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 FYV6YNL133C 522 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 MDM12YOL009C 816 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 HAP5YOR358W 729 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 RIB7YBR153W 735 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 CTF18YMR078C 2226 nt7.62□□□□□ -1.19
TY1A-MR1Q04215 KSS1YGR040W 1107 nt7.61□□□□□ -1.19
TY1A-MR1Q04215 YML094C-AYML094C-A 402 nt7.61□□□□□ -1.19
TY1A-MR1Q04215 YNL174WYNL174W 573 nt7.61□□□□□ -1.19
TY1A-MR1Q04215 GAL3YDR009W 1563 nt7.61□□□□□ -1.19
TY1A-MR1Q04215 TRP1YDR007W 675 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 YDR336WYDR336W 945 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 LSM6YDR378C 261 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 YFL015W-AYFL015W-A 318 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 IMO32YGR031W 1029 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 MIM1YOL026C 342 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 YBR013CYBR013C 390 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 GPI2YPL076W 843 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 IFA38YBR159W 1044 nt7.6□□□□□ -1.19
TY1A-MR1Q04215 YFL052WYFL052W 1398 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 SUV3YPL029W 2214 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 YDR124WYDR124W 975 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 YEA6YEL006W 1008 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 SPO12YHR152W 522 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 YLR379WYLR379W 375 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 TRM10YOL093W 882 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 ALG5YPL227C 1005 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 UBP8YMR223W 1416 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 PUS7YOR243C 2031 nt7.59□□□□□ -1.19
TY1A-MR1Q04215 ADE8YDR408C 645 nt7.58□□□□□ -1.2
TY1A-MR1Q04215 RPN14YGL004C 1254 nt7.58□□□□□ -1.2
TY1A-MR1Q04215 RHO3YIL118W 696 nt7.58□□□□□ -1.2
TY1A-MR1Q04215 SCP1YOR367W 603 nt7.58□□□□□ -1.2
TY1A-MR1Q04215 YGL214WYGL214W 486 nt7.57□□□□□ -1.2
TY1A-MR1Q04215 YGR016WYGR016W 573 nt7.57□□□□□ -1.2
TY1A-MR1Q04215 YJR114WYJR114W 393 nt7.57□□□□□ -1.2
TY1A-MR1Q04215 YLR437C-AYLR437C-A 228 nt7.57□□□□□ -1.2
TY1A-MR1Q04215 RRT1YBL048W 312 nt7.57□□□□□ -1.2
TY1A-MR1Q04215 MRP7YNL005C 1116 nt7.57□□□□□ -1.2
TY1A-MR1Q04215 YNR025CYNR025C 360 nt7.57□□□□□ -1.2
TY1A-MR1Q04215 YPL162CYPL162C 822 nt7.57□□□□□ -1.2
TY1A-MR1Q04215 MAK32YCR019W 1092 nt7.56□□□□□ -1.2
TY1A-MR1Q04215 REV7YIL139C 738 nt7.56□□□□□ -1.2
TY1A-MR1Q04215 MMM1YLL006W 1281 nt7.56□□□□□ -1.2
TY1A-MR1Q04215 JNM1YMR294W 1122 nt7.56□□□□□ -1.2
TY1A-MR1Q04215 MTQ1YNL063W 945 nt7.56□□□□□ -1.2
TY1A-MR1Q04215 JID1YPR061C 906 nt7.56□□□□□ -1.2
TY1A-MR1Q04215 KEL3YPL263C 1956 nt7.56□□□□□ -1.2
TY1A-MR1Q04215 HBS1YKR084C 1836 nt7.56□□□□□ -1.2
TY1A-MR1Q04215 RRP14YKL082C 1305 nt7.55□□□□□ -1.2
TY1A-MR1Q04215 HIM1YDR317W 1245 nt7.55□□□□□ -1.2
TY1A-MR1Q04215 ERP5YHR110W 639 nt7.55□□□□□ -1.2
TY1A-MR1Q04215 YLR365WYLR365W 333 nt7.55□□□□□ -1.2
TY1A-MR1Q04215 IES2YNL215W 963 nt7.55□□□□□ -1.2
TY1A-MR1Q04215 GPM3YOL056W 912 nt7.55□□□□□ -1.2
TY1A-MR1Q04215 YOR105WYOR105W 327 nt7.55□□□□□ -1.2
TY1A-MR1Q04215 YHR177WYHR177W 1362 nt7.55□□□□□ -1.2
TY1A-MR1Q04215 ERG24YNL280C 1317 nt7.54□□□□□ -1.2
TY1A-MR1Q04215 YDR306CYDR306C 1437 nt7.54□□□□□ -1.2
TY1A-MR1Q04215 KXD1YGL079W 657 nt7.54□□□□□ -1.2
TY1A-MR1Q04215 YGL235WYGL235W 537 nt7.54□□□□□ -1.2
TY1A-MR1Q04215 HRT1YOL133W 366 nt7.54□□□□□ -1.2
TY1A-MR1Q04215 RFM1YOR279C 933 nt7.54□□□□□ -1.2
TY1A-MR1Q04215 MEK1YOR351C 1494 nt7.54□□□□□ -1.2
TY1A-MR1Q04215 FRA1YLL029W 2250 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 YFT2YDR319C 825 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 SNF4YGL115W 969 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 SAY1YGR263C 1275 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 OPI1YHL020C 1215 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 MPM1YJL066C 759 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 OPI3YJR073C 621 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 YOR364WYOR364W 369 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 APM3YBR288C 1452 nt7.53□□□□□ -1.2
TY1A-MR1Q04215 TRP2YER090W 1524 nt7.52□□□□□ -1.2
TY1A-MR1Q04215 MDL2YPL270W 2322 nt7.52□□□□□ -1.2
TY1A-MR1Q04215 GLR1YPL091W 1452 nt7.52□□□□□ -1.21
TY1A-MR1Q04215 YPR084WYPR084W 1371 nt7.52□□□□□ -1.21
TY1A-MR1Q04215 PCL2YDL127W 927 nt7.52□□□□□ -1.21
TY1A-MR1Q04215 IME1YJR094C 1083 nt7.52□□□□□ -1.21
TY1A-MR1Q04215 URA5YML106W 681 nt7.52□□□□□ -1.21
TY1A-MR1Q04215 CRC1YOR100C 984 nt7.52□□□□□ -1.21
TY1A-MR1Q04215 MTO1YGL236C 2010 nt7.52□□□□□ -1.21
TY1A-MR1Q04215 NMA2YGR010W 1188 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 ERG25YGR060W 930 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 YHR112CYHR112C 1137 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 YJL032WYJL032W 315 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 GPM1YKL152C 744 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 YAL066WYAL066W 309 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 HXT11YOL156W 1704 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 THI6YPL214C 1623 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 SFL1YOR140W 2301 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 RIB2YOL066C 1776 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 CLD1YGR110W 1338 nt7.51□□□□□ -1.21
TY1A-MR1Q04215 YLR108CYLR108C 1458 nt7.5□□□□□ -1.21
TY1A-MR1Q04215 YPL245WYPL245W 1365 nt7.5□□□□□ -1.21
TY1A-MR1Q04215 DUO1YGL061C 744 nt7.5□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 47.5 ms