Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CKS1BP61024 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CKS1BP61024 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17■□□□□ 0.31
CKS1BP61024 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
CKS1BP61024 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17■□□□□ 0.31
CKS1BP61024 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CKS1BP61024 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC16.99■□□□□ 0.31
CKS1BP61024 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKS1BP61024 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.99■□□□□ 0.31
CKS1BP61024 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKS1BP61024 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CKS1BP61024 LINC01003-201ENST00000564834 1764 ntBASIC16.99■□□□□ 0.31
CKS1BP61024 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CKS1BP61024 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CKS1BP61024 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
CKS1BP61024 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.98■□□□□ 0.31
CKS1BP61024 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CKS1BP61024 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.98■□□□□ 0.31
CKS1BP61024 AL449106.1-201ENST00000608517 1980 ntBASIC16.98■□□□□ 0.31
CKS1BP61024 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CKS1BP61024 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS1BP61024 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC16.97■□□□□ 0.31
CKS1BP61024 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS1BP61024 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS1BP61024 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CKS1BP61024 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS1BP61024 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CKS1BP61024 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS1BP61024 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CKS1BP61024 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CKS1BP61024 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CKS1BP61024 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC16.96■□□□□ 0.31
CKS1BP61024 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CKS1BP61024 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.95■□□□□ 0.3
CKS1BP61024 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CKS1BP61024 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC16.95■□□□□ 0.3
CKS1BP61024 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC16.94■□□□□ 0.3
CKS1BP61024 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CKS1BP61024 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CKS1BP61024 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS1BP61024 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS1BP61024 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS1BP61024 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CKS1BP61024 AC079834.2-201ENST00000609776 1949 ntBASIC16.94■□□□□ 0.3
CKS1BP61024 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CKS1BP61024 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CKS1BP61024 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CKS1BP61024 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC16.92■□□□□ 0.3
CKS1BP61024 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CKS1BP61024 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CKS1BP61024 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.91■□□□□ 0.3
CKS1BP61024 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CKS1BP61024 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 AC012676.1-201ENST00000574705 1949 ntBASIC16.91■□□□□ 0.3
CKS1BP61024 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 AL391121.1-201ENST00000607967 1349 ntBASIC16.91■□□□□ 0.3
CKS1BP61024 AC100797.4-201ENST00000631653 1827 ntBASIC16.91■□□□□ 0.3
CKS1BP61024 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.91■□□□□ 0.3
CKS1BP61024 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CKS1BP61024 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS1BP61024 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS1BP61024 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CKS1BP61024 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms