Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 RNH1YMR234W 1047 nt7.94□□□□□ -1.14
RPT4P53549 PUS7YOR243C 2031 nt7.94□□□□□ -1.14
RPT4P53549 MHP1YJL042W 4197 nt7.93□□□□□ -1.14
RPT4P53549 RNH201YNL072W 924 nt7.93□□□□□ -1.14
RPT4P53549 NME1NME1 340 nt7.93□□□□□ -1.14
RPT4P53549 RPL31BYLR406C 342 nt7.92□□□□□ -1.14
RPT4P53549 YMR295CYMR295C 594 nt7.92□□□□□ -1.14
RPT4P53549 YOR041CYOR041C 432 nt7.92□□□□□ -1.14
RPT4P53549 DLD1YDL174C 1764 nt7.92□□□□□ -1.14
RPT4P53549 VMA3YEL027W 483 nt7.91□□□□□ -1.14
RPT4P53549 YKL018C-AYKL018C-A 300 nt7.91□□□□□ -1.14
RPT4P53549 HXK1YFR053C 1458 nt7.91□□□□□ -1.14
RPT4P53549 ALD5YER073W 1563 nt7.91□□□□□ -1.14
RPT4P53549 DOT1YDR440W 1749 nt7.91□□□□□ -1.14
RPT4P53549 SWD1YAR003W 1281 nt7.9□□□□□ -1.14
RPT4P53549 MRPL23YOR150W 492 nt7.9□□□□□ -1.14
RPT4P53549 EXG2YDR261C 1689 nt7.89□□□□□ -1.15
RPT4P53549 PFS2YNL317W 1398 nt7.89□□□□□ -1.15
RPT4P53549 FCP1YMR277W 2199 nt7.89□□□□□ -1.15
RPT4P53549 COQ3YOL096C 939 nt7.89□□□□□ -1.15
RPT4P53549 YPR127WYPR127W 1038 nt7.89□□□□□ -1.15
RPT4P53549 TOM71YHR117W 1920 nt7.88□□□□□ -1.15
RPT4P53549 HSV2YGR223C 1347 nt7.88□□□□□ -1.15
RPT4P53549 PRE3YJL001W 648 nt7.88□□□□□ -1.15
RPT4P53549 MSG5YNL053W 1470 nt7.87□□□□□ -1.15
RPT4P53549 CDC23YHR166C 1881 nt7.87□□□□□ -1.15
RPT4P53549 HED1YDR014W-A 489 nt7.87□□□□□ -1.15
RPT4P53549 NSG2YNL156C 900 nt7.87□□□□□ -1.15
RPT4P53549 YOR200WYOR200W 399 nt7.87□□□□□ -1.15
RPT4P53549 GNP1YDR508C 1992 nt7.86□□□□□ -1.15
RPT4P53549 UIP5YKR044W 1332 nt7.86□□□□□ -1.15
RPT4P53549 ZWF1YNL241C 1518 nt7.86□□□□□ -1.15
RPT4P53549 MAL31YBR298C 1845 nt7.85□□□□□ -1.15
RPT4P53549 YNL097W-AYNL097W-A 156 nt7.85□□□□□ -1.15
RPT4P53549 MRPL10YNL284C 969 nt7.85□□□□□ -1.15
RPT4P53549 NUP57YGR119C 1626 nt7.85□□□□□ -1.15
RPT4P53549 ADH5YBR145W 1056 nt7.84□□□□□ -1.15
RPT4P53549 IRC5YFR038W 2562 nt7.83□□□□□ -1.16
RPT4P53549 FLC2YAL053W 2352 nt7.83□□□□□ -1.16
RPT4P53549 MPC2YHR162W 390 nt7.83□□□□□ -1.16
RPT4P53549 YRB2YIL063C 984 nt7.82□□□□□ -1.16
RPT4P53549 YLR157W-EYLR157W-E 165 nt7.82□□□□□ -1.16
RPT4P53549 YLR173WYLR173W 1827 nt7.81□□□□□ -1.16
RPT4P53549 RPS28AYOR167C 204 nt7.81□□□□□ -1.16
RPT4P53549 SGF29YCL010C 780 nt7.81□□□□□ -1.16
RPT4P53549 FCY2YER056C 1602 nt7.81□□□□□ -1.16
RPT4P53549 CBR1YIL043C 855 nt7.8□□□□□ -1.16
RPT4P53549 TMA46YOR091W 1038 nt7.8□□□□□ -1.16
RPT4P53549 DSF1YEL070W 1509 nt7.79□□□□□ -1.16
RPT4P53549 YNR073CYNR073C 1509 nt7.79□□□□□ -1.16
RPT4P53549 PPH22YDL188C 1134 nt7.79□□□□□ -1.16
RPT4P53549 YHL018WYHL018W 363 nt7.79□□□□□ -1.16
RPT4P53549 YHR213W-BYHR213W-B 300 nt7.79□□□□□ -1.16
RPT4P53549 YAR064WYAR064W 300 nt7.79□□□□□ -1.16
RPT4P53549 MIX17YMR002W 471 nt7.79□□□□□ -1.16
RPT4P53549 LYS21YDL131W 1323 nt7.78□□□□□ -1.16
RPT4P53549 CCT8YJL008C 1707 nt7.78□□□□□ -1.16
RPT4P53549 HXT9YJL219W 1704 nt7.78□□□□□ -1.16
RPT4P53549 YRF1-1YDR545W 5391 nt7.78□□□□□ -1.16
RPT4P53549 YRF1-5YLR467W 5391 nt7.78□□□□□ -1.16
RPT4P53549 YRF1-8YOR396W 5391 nt7.78□□□□□ -1.16
RPT4P53549 ZRT2YLR130C 1269 nt7.78□□□□□ -1.16
RPT4P53549 BEM1YBR200W 1656 nt7.78□□□□□ -1.16
RPT4P53549 YHK8YHR048W 1545 nt7.78□□□□□ -1.16
RPT4P53549 IRC7YFR055W 1023 nt7.77□□□□□ -1.17
RPT4P53549 TDP1YBR223C 1635 nt7.77□□□□□ -1.17
RPT4P53549 TRS31YDR472W 852 nt7.76□□□□□ -1.17
RPT4P53549 UIP4YPL186C 915 nt7.76□□□□□ -1.17
RPT4P53549 YMR279CYMR279C 1623 nt7.76□□□□□ -1.17
RPT4P53549 COQ1YBR003W 1422 nt7.76□□□□□ -1.17
RPT4P53549 YPR196WYPR196W 1413 nt7.76□□□□□ -1.17
RPT4P53549 YMR034CYMR034C 1305 nt7.76□□□□□ -1.17
RPT4P53549 URH1YDR400W 1023 nt7.75□□□□□ -1.17
RPT4P53549 YDL144CYDL144C 1071 nt7.74□□□□□ -1.17
RPT4P53549 YSC83YHR017W 1158 nt7.74□□□□□ -1.17
RPT4P53549 FPR3YML074C 1236 nt7.74□□□□□ -1.17
RPT4P53549 SCS7YMR272C 1155 nt7.74□□□□□ -1.17
RPT4P53549 CTF19YPL018W 1110 nt7.74□□□□□ -1.17
RPT4P53549 YPL264CYPL264C 1062 nt7.74□□□□□ -1.17
RPT4P53549 CAN1YEL063C 1773 nt7.74□□□□□ -1.17
RPT4P53549 HVG1YER039C 750 nt7.73□□□□□ -1.17
RPT4P53549 MOG1YJR074W 657 nt7.73□□□□□ -1.17
RPT4P53549 VPS24YKL041W 675 nt7.73□□□□□ -1.17
RPT4P53549 MSO1YNR049C 633 nt7.73□□□□□ -1.17
RPT4P53549 ALR1YOL130W 2580 nt7.73□□□□□ -1.17
RPT4P53549 RTG2YGL252C 1767 nt7.72□□□□□ -1.17
RPT4P53549 YHR020WYHR020W 2067 nt7.71□□□□□ -1.17
RPT4P53549 ATP10YLR393W 840 nt7.71□□□□□ -1.18
RPT4P53549 PEX3YDR329C 1326 nt7.71□□□□□ -1.18
RPT4P53549 DID2YKR035W-A 615 nt7.7□□□□□ -1.18
RPT4P53549 ENB1YOL158C 1821 nt7.7□□□□□ -1.18
RPT4P53549 EMP65YER140W 1671 nt7.69□□□□□ -1.18
RPT4P53549 PTC3YBL056W 1407 nt7.69□□□□□ -1.18
RPT4P53549 RMD8YFR048W 1989 nt7.68□□□□□ -1.18
RPT4P53549 LOT6YLR011W 576 nt7.68□□□□□ -1.18
RPT4P53549 IVY1YDR229W 1362 nt7.68□□□□□ -1.18
RPT4P53549 COX10YPL172C 1389 nt7.68□□□□□ -1.18
RPT4P53549 YDL177CYDL177C 513 nt7.67□□□□□ -1.18
RPT4P53549 TUF1YOR187W 1314 nt7.67□□□□□ -1.18
RPT4P53549 PPM2YOL141W 2088 nt7.67□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 52.7 ms