Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 PAM17YKR065C 594 nt5.87□□□□□ -1.47
SSU72P53538 YFL052WYFL052W 1398 nt5.87□□□□□ -1.47
SSU72P53538 CDC3YLR314C 1563 nt5.87□□□□□ -1.47
SSU72P53538 EFT2YDR385W 2529 nt5.86□□□□□ -1.47
SSU72P53538 EFT1YOR133W 2529 nt5.86□□□□□ -1.47
SSU72P53538 AVT4YNL101W 2142 nt5.86□□□□□ -1.47
SSU72P53538 FCY2YER056C 1602 nt5.86□□□□□ -1.47
SSU72P53538 NUP57YGR119C 1626 nt5.86□□□□□ -1.47
SSU72P53538 PET117YER058W 324 nt5.86□□□□□ -1.47
SSU72P53538 LOT6YLR011W 576 nt5.86□□□□□ -1.47
SSU72P53538 CCW12YLR110C 402 nt5.86□□□□□ -1.47
SSU72P53538 FUS3YBL016W 1062 nt5.86□□□□□ -1.47
SSU72P53538 RDL2YOR286W 450 nt5.86□□□□□ -1.47
SSU72P53538 PAU21YOR394W 495 nt5.86□□□□□ -1.47
SSU72P53538 PAU22YPL282C 495 nt5.86□□□□□ -1.47
SSU72P53538 RPL43AYPR043W 279 nt5.86□□□□□ -1.47
SSU72P53538 TRP5YGL026C 2124 nt5.86□□□□□ -1.47
SSU72P53538 SPS22YCL048W 1392 nt5.85□□□□□ -1.47
SSU72P53538 YNL017CYNL017C 339 nt5.85□□□□□ -1.47
SSU72P53538 SDH8YBR269C 417 nt5.85□□□□□ -1.47
SSU72P53538 ENB1YOL158C 1821 nt5.85□□□□□ -1.47
SSU72P53538 ACS1YAL054C 2142 nt5.84□□□□□ -1.47
SSU72P53538 tL(UAA)B1tL(UAA)B1 84 nt5.84□□□□□ -1.47
SSU72P53538 tL(UAA)B2tL(UAA)B2 84 nt5.84□□□□□ -1.47
SSU72P53538 tL(UAA)DtL(UAA)D 84 nt5.84□□□□□ -1.47
SSU72P53538 SUP51tL(UAA)J 84 nt5.84□□□□□ -1.47
SSU72P53538 tL(UAA)KtL(UAA)K 84 nt5.84□□□□□ -1.47
SSU72P53538 tL(UAA)LtL(UAA)L 84 nt5.84□□□□□ -1.47
SSU72P53538 tL(UAA)NtL(UAA)N 84 nt5.84□□□□□ -1.47
SSU72P53538 RRP46YGR095C 672 nt5.84□□□□□ -1.47
SSU72P53538 NCA3YJL116C 1014 nt5.84□□□□□ -1.47
SSU72P53538 CDC7YDL017W 1524 nt5.84□□□□□ -1.48
SSU72P53538 SNF4YGL115W 969 nt5.83□□□□□ -1.48
SSU72P53538 NMA2YGR010W 1188 nt5.83□□□□□ -1.48
SSU72P53538 CTF8YHR191C 402 nt5.83□□□□□ -1.48
SSU72P53538 YMR074CYMR074C 438 nt5.83□□□□□ -1.48
SSU72P53538 SUN4YNL066W 1263 nt5.83□□□□□ -1.48
SSU72P53538 CWC27YPL064C 906 nt5.83□□□□□ -1.48
SSU72P53538 LAG2YOL025W 1983 nt5.83□□□□□ -1.48
SSU72P53538 CMR1YDL156W 1569 nt5.83□□□□□ -1.48
SSU72P53538 PGI1YBR196C 1665 nt5.82□□□□□ -1.48
SSU72P53538 GUF1YLR289W 1938 nt5.82□□□□□ -1.48
SSU72P53538 GDA1YEL042W 1557 nt5.82□□□□□ -1.48
SSU72P53538 YLR112WYLR112W 420 nt5.82□□□□□ -1.48
SSU72P53538 YOR343CYOR343C 327 nt5.82□□□□□ -1.48
SSU72P53538 ASN1YPR145W 1719 nt5.82□□□□□ -1.48
SSU72P53538 YPQ2YDR352W 954 nt5.81□□□□□ -1.48
SSU72P53538 RDR1YOR380W 1641 nt5.81□□□□□ -1.48
SSU72P53538 JIP4YDR475C 2631 nt5.8□□□□□ -1.48
SSU72P53538 YML122CYML122C 381 nt5.8□□□□□ -1.48
SSU72P53538 YPR127WYPR127W 1038 nt5.8□□□□□ -1.48
SSU72P53538 TKL1YPR074C 2043 nt5.8□□□□□ -1.48
SSU72P53538 KNS1YLL019C 2214 nt5.79□□□□□ -1.48
SSU72P53538 TUB1YML085C 1344 nt5.79□□□□□ -1.48
SSU72P53538 EMW1YNL313C 2715 nt5.79□□□□□ -1.48
SSU72P53538 YLR358CYLR358C 564 nt5.79□□□□□ -1.48
SSU72P53538 YOR012WYOR012W 414 nt5.79□□□□□ -1.48
SSU72P53538 DPM1YPR183W 804 nt5.79□□□□□ -1.48
SSU72P53538 VHT1YGR065C 1782 nt5.78□□□□□ -1.48
SSU72P53538 SOH1YGL127C 384 nt5.78□□□□□ -1.48
SSU72P53538 CHS5YLR330W 2016 nt5.78□□□□□ -1.48
SSU72P53538 EXG2YDR261C 1689 nt5.78□□□□□ -1.48
SSU72P53538 CHL4YDR254W 1377 nt5.78□□□□□ -1.48
SSU72P53538 RIO1YOR119C 1455 nt5.77□□□□□ -1.49
SSU72P53538 PHO85YPL031C 918 nt5.77□□□□□ -1.49
SSU72P53538 PAP2YOL115W 1755 nt5.77□□□□□ -1.49
SSU72P53538 SAC6YDR129C 1929 nt5.76□□□□□ -1.49
SSU72P53538 CDC16YKL022C 2523 nt5.76□□□□□ -1.49
SSU72P53538 MPE1YKL059C 1326 nt5.75□□□□□ -1.49
SSU72P53538 TIM22YDL217C 624 nt5.75□□□□□ -1.49
SSU72P53538 DOC1YGL240W 753 nt5.75□□□□□ -1.49
SSU72P53538 MTR3YGR158C 753 nt5.75□□□□□ -1.49
SSU72P53538 THR1YHR025W 1074 nt5.75□□□□□ -1.49
SSU72P53538 YAL016C-AYAL016C-A 315 nt5.75□□□□□ -1.49
SSU72P53538 ARP3YJR065C 1350 nt5.75□□□□□ -1.49
SSU72P53538 KTR5YNL029C 1569 nt5.75□□□□□ -1.49
SSU72P53538 DML1YMR211W 1428 nt5.74□□□□□ -1.49
SSU72P53538 ERG27YLR100W 1044 nt5.74□□□□□ -1.49
SSU72P53538 MIX17YMR002W 471 nt5.74□□□□□ -1.49
SSU72P53538 SNT309YPR101W 528 nt5.74□□□□□ -1.49
SSU72P53538 YBR124WYBR124W 360 nt5.74□□□□□ -1.49
SSU72P53538 SKI2YLR398C 3864 nt5.74□□□□□ -1.49
SSU72P53538 TDP1YBR223C 1635 nt5.74□□□□□ -1.49
SSU72P53538 ISC1YER019W 1434 nt5.74□□□□□ -1.49
SSU72P53538 PHO3YBR092C 1404 nt5.74□□□□□ -1.49
SSU72P53538 ATG22YCL038C 1587 nt5.73□□□□□ -1.49
SSU72P53538 NFS1YCL017C 1494 nt5.73□□□□□ -1.49
SSU72P53538 IVY1YDR229W 1362 nt5.73□□□□□ -1.49
SSU72P53538 BUD20YLR074C 501 nt5.73□□□□□ -1.49
SSU72P53538 MCH2YKL221W 1422 nt5.73□□□□□ -1.49
SSU72P53538 DLD1YDL174C 1764 nt5.72□□□□□ -1.49
SSU72P53538 SET5YHR207C 1581 nt5.72□□□□□ -1.49
SSU72P53538 RTC4YNL254C 1206 nt5.72□□□□□ -1.49
SSU72P53538 GPT2YKR067W 2232 nt5.72□□□□□ -1.49
SSU72P53538 RAP1YNL216W 2484 nt5.72□□□□□ -1.49
SSU72P53538 TEL2YGR099W 2067 nt5.71□□□□□ -1.49
SSU72P53538 ATP23YNR020C 813 nt5.71□□□□□ -1.5
SSU72P53538 ARC35YNR035C 1029 nt5.71□□□□□ -1.5
SSU72P53538 TFB4YPR056W 1017 nt5.71□□□□□ -1.5
SSU72P53538 AMN1YBR158W 1650 nt5.71□□□□□ -1.5
Retrieved 100 of 7,029 protein–RNA pairs in 46.1 ms