Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YRB2YIL063C 984 nt10.37□□□□□ -0.75
TY1B-JR1P47098 DIA4YHR011W 1341 nt10.36□□□□□ -0.75
TY1B-JR1P47098 YNL017CYNL017C 339 nt10.35□□□□□ -0.75
TY1B-JR1P47098 VPS24YKL041W 675 nt10.34□□□□□ -0.75
TY1B-JR1P47098 SGF29YCL010C 780 nt10.34□□□□□ -0.75
TY1B-JR1P47098 ADE2YOR128C 1716 nt10.34□□□□□ -0.75
TY1B-JR1P47098 SYF2YGR129W 648 nt10.34□□□□□ -0.75
TY1B-JR1P47098 YHR213W-AYHR213W-A 234 nt10.34□□□□□ -0.75
TY1B-JR1P47098 DOT1YDR440W 1749 nt10.33□□□□□ -0.76
TY1B-JR1P47098 YDR327WYDR327W 327 nt10.33□□□□□ -0.76
TY1B-JR1P47098 YDL218WYDL218W 954 nt10.32□□□□□ -0.76
TY1B-JR1P47098 YGL260WYGL260W 231 nt10.31□□□□□ -0.76
TY1B-JR1P47098 SNF7YLR025W 723 nt10.3□□□□□ -0.76
TY1B-JR1P47098 MSO1YNR049C 633 nt10.3□□□□□ -0.76
TY1B-JR1P47098 ZRT2YLR130C 1269 nt10.29□□□□□ -0.76
TY1B-JR1P47098 KSH1YNL024C-A 219 nt10.29□□□□□ -0.76
TY1B-JR1P47098 ENV7YPL236C 1095 nt10.29□□□□□ -0.76
TY1B-JR1P47098 VBA5YKR105C 1749 nt10.28□□□□□ -0.76
TY1B-JR1P47098 FRA1YLL029W 2250 nt10.28□□□□□ -0.76
TY1B-JR1P47098 YDL172CYDL172C 480 nt10.27□□□□□ -0.77
TY1B-JR1P47098 SNN1YNL086W 309 nt10.27□□□□□ -0.77
TY1B-JR1P47098 ELA1YNL230C 1140 nt10.26□□□□□ -0.77
TY1B-JR1P47098 RUP1YOR138C 2016 nt10.26□□□□□ -0.77
TY1B-JR1P47098 YLR126CYLR126C 756 nt10.25□□□□□ -0.77
TY1B-JR1P47098 ERP5YHR110W 639 nt10.24□□□□□ -0.77
TY1B-JR1P47098 SIT4YDL047W 936 nt10.24□□□□□ -0.77
TY1B-JR1P47098 CBR1YIL043C 855 nt10.24□□□□□ -0.77
TY1B-JR1P47098 PSR2YLR019W 1194 nt10.24□□□□□ -0.77
TY1B-JR1P47098 YNL200CYNL200C 741 nt10.24□□□□□ -0.77
TY1B-JR1P47098 DFM1YDR411C 1026 nt10.23□□□□□ -0.77
TY1B-JR1P47098 PRY3YJL078C 2646 nt10.22□□□□□ -0.77
TY1B-JR1P47098 ERG1YGR175C 1491 nt10.22□□□□□ -0.77
TY1B-JR1P47098 MTF2YDL044C 1323 nt10.22□□□□□ -0.77
TY1B-JR1P47098 YHK8YHR048W 1545 nt10.22□□□□□ -0.77
TY1B-JR1P47098 SDH4YDR178W 546 nt10.21□□□□□ -0.77
TY1B-JR1P47098 TCB1YOR086C 3561 nt10.21□□□□□ -0.77
TY1B-JR1P47098 NUP57YGR119C 1626 nt10.2□□□□□ -0.78
TY1B-JR1P47098 YBR056C-BYBR056C-B 159 nt10.19□□□□□ -0.78
TY1B-JR1P47098 DUR3YHL016C 2208 nt10.19□□□□□ -0.78
TY1B-JR1P47098 NHA1YLR138W 2958 nt10.19□□□□□ -0.78
TY1B-JR1P47098 DID2YKR035W-A 615 nt10.19□□□□□ -0.78
TY1B-JR1P47098 SWD1YAR003W 1281 nt10.19□□□□□ -0.78
TY1B-JR1P47098 HBS1YKR084C 1836 nt10.18□□□□□ -0.78
TY1B-JR1P47098 PPH22YDL188C 1134 nt10.18□□□□□ -0.78
TY1B-JR1P47098 SCS7YMR272C 1155 nt10.18□□□□□ -0.78
TY1B-JR1P47098 COQ1YBR003W 1422 nt10.17□□□□□ -0.78
TY1B-JR1P47098 IRC5YFR038W 2562 nt10.17□□□□□ -0.78
TY1B-JR1P47098 DOT5YIL010W 648 nt10.17□□□□□ -0.78
TY1B-JR1P47098 SHP1YBL058W 1272 nt10.17□□□□□ -0.78
TY1B-JR1P47098 PHO85YPL031C 918 nt10.17□□□□□ -0.78
TY1B-JR1P47098 RPN11YFR004W 921 nt10.16□□□□□ -0.78
TY1B-JR1P47098 SGF73YGL066W 1974 nt10.15□□□□□ -0.78
TY1B-JR1P47098 EXG2YDR261C 1689 nt10.15□□□□□ -0.78
TY1B-JR1P47098 RSC9YML127W 1746 nt10.15□□□□□ -0.79
TY1B-JR1P47098 PTC3YBL056W 1407 nt10.14□□□□□ -0.79
TY1B-JR1P47098 HEL2YDR266C 1920 nt10.13□□□□□ -0.79
TY1B-JR1P47098 GCV3YAL044C 513 nt10.13□□□□□ -0.79
TY1B-JR1P47098 HEM2YGL040C 1029 nt10.12□□□□□ -0.79
TY1B-JR1P47098 PTC4YBR125C 1182 nt10.11□□□□□ -0.79
TY1B-JR1P47098 MSG5YNL053W 1470 nt10.11□□□□□ -0.79
TY1B-JR1P47098 MNS1YJR131W 1650 nt10.1□□□□□ -0.79
TY1B-JR1P47098 YGR054WYGR054W 1929 nt10.1□□□□□ -0.79
TY1B-JR1P47098 YMR034CYMR034C 1305 nt10.1□□□□□ -0.79
TY1B-JR1P47098 CCT8YJL008C 1707 nt10.1□□□□□ -0.79
TY1B-JR1P47098 YSC83YHR017W 1158 nt10.09□□□□□ -0.79
TY1B-JR1P47098 RSC30YHR056C 2652 nt10.09□□□□□ -0.79
TY1B-JR1P47098 RPL10YLR075W 666 nt10.08□□□□□ -0.8
TY1B-JR1P47098 URH1YDR400W 1023 nt10.07□□□□□ -0.8
TY1B-JR1P47098 MRPS12YNR036C 462 nt10.07□□□□□ -0.8
TY1B-JR1P47098 MDH2YOL126C 1134 nt10.07□□□□□ -0.8
TY1B-JR1P47098 TIM22YDL217C 624 nt10.06□□□□□ -0.8
TY1B-JR1P47098 RVB2YPL235W 1416 nt10.06□□□□□ -0.8
TY1B-JR1P47098 YDR015CYDR015C 240 nt10.06□□□□□ -0.8
TY1B-JR1P47098 BUD32YGR262C 786 nt10.06□□□□□ -0.8
TY1B-JR1P47098 ATP10YLR393W 840 nt10.06□□□□□ -0.8
TY1B-JR1P47098 YOR072WYOR072W 315 nt10.06□□□□□ -0.8
TY1B-JR1P47098 CDC23YHR166C 1881 nt10.05□□□□□ -0.8
TY1B-JR1P47098 MLS1YNL117W 1665 nt10.05□□□□□ -0.8
TY1B-JR1P47098 UTP4YDR324C 2331 nt10.05□□□□□ -0.8
TY1B-JR1P47098 GNA1YFL017C 480 nt10.04□□□□□ -0.8
TY1B-JR1P47098 SRL2YLR082C 1179 nt10.03□□□□□ -0.8
TY1B-JR1P47098 AMN1YBR158W 1650 nt10.03□□□□□ -0.8
TY1B-JR1P47098 GON7YJL184W 372 nt10.02□□□□□ -0.81
TY1B-JR1P47098 FCP1YMR277W 2199 nt10.02□□□□□ -0.81
TY1B-JR1P47098 PPM2YOL141W 2088 nt10.01□□□□□ -0.81
TY1B-JR1P47098 GLC8YMR311C 690 nt10.01□□□□□ -0.81
TY1B-JR1P47098 ARE2YNR019W 1929 nt10□□□□□ -0.81
TY1B-JR1P47098 YNL285WYNL285W 372 nt10□□□□□ -0.81
TY1B-JR1P47098 TSR3YOR006C 942 nt10□□□□□ -0.81
TY1B-JR1P47098 YPR127WYPR127W 1038 nt10□□□□□ -0.81
TY1B-JR1P47098 POX1YGL205W 2247 nt9.99□□□□□ -0.81
TY1B-JR1P47098 MRPS28YDR337W 861 nt9.98□□□□□ -0.81
TY1B-JR1P47098 ECM14YHR132C 1293 nt9.98□□□□□ -0.81
TY1B-JR1P47098 OGG1YML060W 1131 nt9.98□□□□□ -0.81
TY1B-JR1P47098 YOR041CYOR041C 432 nt9.98□□□□□ -0.81
TY1B-JR1P47098 AAT2YLR027C 1257 nt9.98□□□□□ -0.81
TY1B-JR1P47098 PMT7YDR307W 1989 nt9.97□□□□□ -0.81
TY1B-JR1P47098 LYS1YIR034C 1122 nt9.97□□□□□ -0.81
TY1B-JR1P47098 FCY2YER056C 1602 nt9.97□□□□□ -0.81
TY1B-JR1P47098 YEL034C-AYEL034C-A 603 nt9.96□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 39.9 ms