Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 ECM19YLR390W 339 nt10.52□□□□□ -0.72
TY2B-LR1P0C2J3 SGF29YCL010C 780 nt10.52□□□□□ -0.72
TY2B-LR1P0C2J3 YRB2YIL063C 984 nt10.52□□□□□ -0.73
TY2B-LR1P0C2J3 VPS24YKL041W 675 nt10.51□□□□□ -0.73
TY2B-LR1P0C2J3 DOT1YDR440W 1749 nt10.5□□□□□ -0.73
TY2B-LR1P0C2J3 YNL017CYNL017C 339 nt10.5□□□□□ -0.73
TY2B-LR1P0C2J3 YGL260WYGL260W 231 nt10.49□□□□□ -0.73
TY2B-LR1P0C2J3 ADE2YOR128C 1716 nt10.49□□□□□ -0.73
TY2B-LR1P0C2J3 YHR213W-AYHR213W-A 234 nt10.49□□□□□ -0.73
TY2B-LR1P0C2J3 YDR327WYDR327W 327 nt10.48□□□□□ -0.73
TY2B-LR1P0C2J3 YDL218WYDL218W 954 nt10.47□□□□□ -0.73
TY2B-LR1P0C2J3 SYF2YGR129W 648 nt10.47□□□□□ -0.73
TY2B-LR1P0C2J3 SNF7YLR025W 723 nt10.47□□□□□ -0.73
TY2B-LR1P0C2J3 MSO1YNR049C 633 nt10.47□□□□□ -0.73
TY2B-LR1P0C2J3 ZRT2YLR130C 1269 nt10.44□□□□□ -0.74
TY2B-LR1P0C2J3 RUP1YOR138C 2016 nt10.44□□□□□ -0.74
TY2B-LR1P0C2J3 VBA5YKR105C 1749 nt10.44□□□□□ -0.74
TY2B-LR1P0C2J3 KSH1YNL024C-A 219 nt10.42□□□□□ -0.74
TY2B-LR1P0C2J3 SNN1YNL086W 309 nt10.42□□□□□ -0.74
TY2B-LR1P0C2J3 ENV7YPL236C 1095 nt10.42□□□□□ -0.74
TY2B-LR1P0C2J3 YDL172CYDL172C 480 nt10.4□□□□□ -0.74
TY2B-LR1P0C2J3 CBR1YIL043C 855 nt10.4□□□□□ -0.74
TY2B-LR1P0C2J3 FRA1YLL029W 2250 nt10.39□□□□□ -0.75
TY2B-LR1P0C2J3 YLR126CYLR126C 756 nt10.39□□□□□ -0.75
TY2B-LR1P0C2J3 ELA1YNL230C 1140 nt10.39□□□□□ -0.75
TY2B-LR1P0C2J3 TCB1YOR086C 3561 nt10.39□□□□□ -0.75
TY2B-LR1P0C2J3 DUR3YHL016C 2208 nt10.39□□□□□ -0.75
TY2B-LR1P0C2J3 PSR2YLR019W 1194 nt10.39□□□□□ -0.75
TY2B-LR1P0C2J3 DFM1YDR411C 1026 nt10.38□□□□□ -0.75
TY2B-LR1P0C2J3 YNL200CYNL200C 741 nt10.38□□□□□ -0.75
TY2B-LR1P0C2J3 HBS1YKR084C 1836 nt10.37□□□□□ -0.75
TY2B-LR1P0C2J3 SIT4YDL047W 936 nt10.37□□□□□ -0.75
TY2B-LR1P0C2J3 SDH4YDR178W 546 nt10.37□□□□□ -0.75
TY2B-LR1P0C2J3 ERP5YHR110W 639 nt10.37□□□□□ -0.75
TY2B-LR1P0C2J3 ERG1YGR175C 1491 nt10.36□□□□□ -0.75
TY2B-LR1P0C2J3 YHK8YHR048W 1545 nt10.36□□□□□ -0.75
TY2B-LR1P0C2J3 DID2YKR035W-A 615 nt10.36□□□□□ -0.75
TY2B-LR1P0C2J3 MTF2YDL044C 1323 nt10.35□□□□□ -0.75
TY2B-LR1P0C2J3 PHO85YPL031C 918 nt10.34□□□□□ -0.75
TY2B-LR1P0C2J3 SWD1YAR003W 1281 nt10.34□□□□□ -0.75
TY2B-LR1P0C2J3 NUP57YGR119C 1626 nt10.34□□□□□ -0.75
TY2B-LR1P0C2J3 SGF73YGL066W 1974 nt10.34□□□□□ -0.75
TY2B-LR1P0C2J3 IRC5YFR038W 2562 nt10.34□□□□□ -0.75
TY2B-LR1P0C2J3 COQ1YBR003W 1422 nt10.33□□□□□ -0.76
TY2B-LR1P0C2J3 PPH22YDL188C 1134 nt10.33□□□□□ -0.76
TY2B-LR1P0C2J3 YBR056C-BYBR056C-B 159 nt10.33□□□□□ -0.76
TY2B-LR1P0C2J3 EXG2YDR261C 1689 nt10.33□□□□□ -0.76
TY2B-LR1P0C2J3 DOT5YIL010W 648 nt10.32□□□□□ -0.76
TY2B-LR1P0C2J3 PRY3YJL078C 2646 nt10.32□□□□□ -0.76
TY2B-LR1P0C2J3 RSC9YML127W 1746 nt10.31□□□□□ -0.76
TY2B-LR1P0C2J3 HEM2YGL040C 1029 nt10.31□□□□□ -0.76
TY2B-LR1P0C2J3 NHA1YLR138W 2958 nt10.3□□□□□ -0.76
TY2B-LR1P0C2J3 SCS7YMR272C 1155 nt10.3□□□□□ -0.76
TY2B-LR1P0C2J3 SHP1YBL058W 1272 nt10.3□□□□□ -0.76
TY2B-LR1P0C2J3 RPN11YFR004W 921 nt10.29□□□□□ -0.76
TY2B-LR1P0C2J3 PTC3YBL056W 1407 nt10.28□□□□□ -0.76
TY2B-LR1P0C2J3 MSG5YNL053W 1470 nt10.28□□□□□ -0.76
TY2B-LR1P0C2J3 PTC4YBR125C 1182 nt10.28□□□□□ -0.76
TY2B-LR1P0C2J3 GCV3YAL044C 513 nt10.27□□□□□ -0.77
TY2B-LR1P0C2J3 YGR054WYGR054W 1929 nt10.27□□□□□ -0.77
TY2B-LR1P0C2J3 MNS1YJR131W 1650 nt10.26□□□□□ -0.77
TY2B-LR1P0C2J3 HEL2YDR266C 1920 nt10.26□□□□□ -0.77
TY2B-LR1P0C2J3 YSC83YHR017W 1158 nt10.26□□□□□ -0.77
TY2B-LR1P0C2J3 CCT8YJL008C 1707 nt10.25□□□□□ -0.77
TY2B-LR1P0C2J3 MDH2YOL126C 1134 nt10.24□□□□□ -0.77
TY2B-LR1P0C2J3 YMR034CYMR034C 1305 nt10.24□□□□□ -0.77
TY2B-LR1P0C2J3 CDC23YHR166C 1881 nt10.22□□□□□ -0.77
TY2B-LR1P0C2J3 URH1YDR400W 1023 nt10.22□□□□□ -0.77
TY2B-LR1P0C2J3 YOR072WYOR072W 315 nt10.21□□□□□ -0.77
TY2B-LR1P0C2J3 RVB2YPL235W 1416 nt10.21□□□□□ -0.77
TY2B-LR1P0C2J3 RPL10YLR075W 666 nt10.21□□□□□ -0.78
TY2B-LR1P0C2J3 ATP10YLR393W 840 nt10.21□□□□□ -0.78
TY2B-LR1P0C2J3 MRPS12YNR036C 462 nt10.21□□□□□ -0.78
TY2B-LR1P0C2J3 YDR015CYDR015C 240 nt10.2□□□□□ -0.78
TY2B-LR1P0C2J3 GNA1YFL017C 480 nt10.2□□□□□ -0.78
TY2B-LR1P0C2J3 BUD32YGR262C 786 nt10.2□□□□□ -0.78
TY2B-LR1P0C2J3 FCP1YMR277W 2199 nt10.19□□□□□ -0.78
TY2B-LR1P0C2J3 TIM22YDL217C 624 nt10.19□□□□□ -0.78
TY2B-LR1P0C2J3 RSC30YHR056C 2652 nt10.19□□□□□ -0.78
TY2B-LR1P0C2J3 MLS1YNL117W 1665 nt10.19□□□□□ -0.78
TY2B-LR1P0C2J3 UTP4YDR324C 2331 nt10.18□□□□□ -0.78
TY2B-LR1P0C2J3 SRL2YLR082C 1179 nt10.18□□□□□ -0.78
TY2B-LR1P0C2J3 GLC8YMR311C 690 nt10.18□□□□□ -0.78
TY2B-LR1P0C2J3 AMN1YBR158W 1650 nt10.17□□□□□ -0.78
TY2B-LR1P0C2J3 PMT7YDR307W 1989 nt10.17□□□□□ -0.78
TY2B-LR1P0C2J3 ARE2YNR019W 1929 nt10.16□□□□□ -0.78
TY2B-LR1P0C2J3 YNL285WYNL285W 372 nt10.16□□□□□ -0.78
TY2B-LR1P0C2J3 PPM2YOL141W 2088 nt10.16□□□□□ -0.78
TY2B-LR1P0C2J3 MRPS28YDR337W 861 nt10.15□□□□□ -0.78
TY2B-LR1P0C2J3 TSR3YOR006C 942 nt10.15□□□□□ -0.78
TY2B-LR1P0C2J3 YOR041CYOR041C 432 nt10.15□□□□□ -0.78
TY2B-LR1P0C2J3 YPR127WYPR127W 1038 nt10.15□□□□□ -0.78
TY2B-LR1P0C2J3 FCY2YER056C 1602 nt10.14□□□□□ -0.79
TY2B-LR1P0C2J3 MAE1YKL029C 2010 nt10.14□□□□□ -0.79
TY2B-LR1P0C2J3 GON7YJL184W 372 nt10.14□□□□□ -0.79
TY2B-LR1P0C2J3 AAT2YLR027C 1257 nt10.14□□□□□ -0.79
TY2B-LR1P0C2J3 POX1YGL205W 2247 nt10.13□□□□□ -0.79
TY2B-LR1P0C2J3 YEL034C-AYEL034C-A 603 nt10.13□□□□□ -0.79
TY2B-LR1P0C2J3 ECM14YHR132C 1293 nt10.13□□□□□ -0.79
TY2B-LR1P0C2J3 OGG1YML060W 1131 nt10.13□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 108.2 ms