Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV9-2A0A087WT02 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 AL162393.1-201ENST00000437852 946 ntBASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 RPS2P35-201ENST00000443417 897 ntBASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAV9-2A0A087WT02 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV9-2A0A087WT02 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
TRAV9-2A0A087WT02 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAV9-2A0A087WT02 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRAV9-2A0A087WT02 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV9-2A0A087WT02 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV9-2A0A087WT02 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV9-2A0A087WT02 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV9-2A0A087WT02 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAV9-2A0A087WT02 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV9-2A0A087WT02 AC044849.2-201ENST00000606596 710 ntBASIC18.15■□□□□ 0.5
TRAV9-2A0A087WT02 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.14■□□□□ 0.5
TRAV9-2A0A087WT02 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-2A0A087WT02 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAV9-2A0A087WT02 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-2A0A087WT02 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-2A0A087WT02 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-2A0A087WT02 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV9-2A0A087WT02 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAV9-2A0A087WT02 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-2A0A087WT02 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-2A0A087WT02 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV9-2A0A087WT02 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV9-2A0A087WT02 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.12■□□□□ 0.49
TRAV9-2A0A087WT02 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRAV9-2A0A087WT02 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TRAV9-2A0A087WT02 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV9-2A0A087WT02 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV9-2A0A087WT02 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV9-2A0A087WT02 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRAV9-2A0A087WT02 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
TRAV9-2A0A087WT02 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-2A0A087WT02 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-2A0A087WT02 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRAV9-2A0A087WT02 DUX4L28-201ENST00000623687 678 ntBASIC18.11■□□□□ 0.49
TRAV9-2A0A087WT02 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV9-2A0A087WT02 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.11■□□□□ 0.49
TRAV9-2A0A087WT02 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV9-2A0A087WT02 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-2A0A087WT02 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-2A0A087WT02 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-2A0A087WT02 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-2A0A087WT02 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV9-2A0A087WT02 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV9-2A0A087WT02 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRAV9-2A0A087WT02 AC087741.3-201ENST00000624270 1347 ntBASIC18.08■□□□□ 0.49
TRAV9-2A0A087WT02 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV9-2A0A087WT02 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV9-2A0A087WT02 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.08■□□□□ 0.48
TRAV9-2A0A087WT02 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV9-2A0A087WT02 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV9-2A0A087WT02 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV9-2A0A087WT02 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV9-2A0A087WT02 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV9-2A0A087WT02 DUSP8P4-201ENST00000399538 1761 ntBASIC18.07■□□□□ 0.48
TRAV9-2A0A087WT02 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV9-2A0A087WT02 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-2A0A087WT02 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-2A0A087WT02 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV9-2A0A087WT02 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV9-2A0A087WT02 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV9-2A0A087WT02 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV9-2A0A087WT02 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV9-2A0A087WT02 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms