Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE1Q9NRR8 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE1Q9NRR8 SLC25A24-204ENST00000569674 2357 ntBASIC13.06□□□□□ -0.32
CDC42SE1Q9NRR8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CDC42SE1Q9NRR8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC13.05□□□□□ -0.32
CDC42SE1Q9NRR8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE1Q9NRR8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CDC42SE1Q9NRR8 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE1Q9NRR8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE1Q9NRR8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE1Q9NRR8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE1Q9NRR8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CDC42SE1Q9NRR8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC42SE1Q9NRR8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CDC42SE1Q9NRR8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC42SE1Q9NRR8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CDC42SE1Q9NRR8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC13.04□□□□□ -0.32
CDC42SE1Q9NRR8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CDC42SE1Q9NRR8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CDC42SE1Q9NRR8 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CDC42SE1Q9NRR8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDC42SE1Q9NRR8 DRD5P2-201ENST00000421395 2012 ntBASIC13.02□□□□□ -0.33
CDC42SE1Q9NRR8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE1Q9NRR8 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDC42SE1Q9NRR8 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC42SE1Q9NRR8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC13.02□□□□□ -0.33
CDC42SE1Q9NRR8 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE1Q9NRR8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC13.01□□□□□ -0.33
CDC42SE1Q9NRR8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE1Q9NRR8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE1Q9NRR8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE1Q9NRR8 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC13.01□□□□□ -0.33
CDC42SE1Q9NRR8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDC42SE1Q9NRR8 RNF165-205ENST00000588679 2904 ntBASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 AC091060.1-201ENST00000623524 1766 ntBASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CDC42SE1Q9NRR8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CDC42SE1Q9NRR8 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE1Q9NRR8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE1Q9NRR8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE1Q9NRR8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE1Q9NRR8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
CDC42SE1Q9NRR8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CDC42SE1Q9NRR8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC12.99□□□□□ -0.33
CDC42SE1Q9NRR8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CDC42SE1Q9NRR8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CDC42SE1Q9NRR8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE1Q9NRR8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CDC42SE1Q9NRR8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE1Q9NRR8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CDC42SE1Q9NRR8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE1Q9NRR8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE1Q9NRR8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CDC42SE1Q9NRR8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDC42SE1Q9NRR8 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CDC42SE1Q9NRR8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDC42SE1Q9NRR8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CDC42SE1Q9NRR8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CDC42SE1Q9NRR8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms