Protein–RNA interactions for Protein: Q96MV1

TMEM56, Transmembrane protein 56, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56Q96MV1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM56Q96MV1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 WHAMMP2-203ENST00000563942 1603 ntBASIC20.41■□□□□ 0.86
TMEM56Q96MV1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM56Q96MV1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.4■□□□□ 0.86
TMEM56Q96MV1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TMEM56Q96MV1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM56Q96MV1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM56Q96MV1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TMEM56Q96MV1 AC005559.1-201ENST00000589661 871 ntBASIC20.39■□□□□ 0.85
TMEM56Q96MV1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM56Q96MV1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM56Q96MV1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TMEM56Q96MV1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM56Q96MV1 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.38■□□□□ 0.85
TMEM56Q96MV1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM56Q96MV1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM56Q96MV1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM56Q96MV1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 AP004609.3-201ENST00000610705 1884 ntBASIC20.35■□□□□ 0.85
TMEM56Q96MV1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
TMEM56Q96MV1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
TMEM56Q96MV1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM56Q96MV1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM56Q96MV1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TMEM56Q96MV1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM56Q96MV1 AC108673.1-201ENST00000510422 1159 ntBASIC20.33■□□□□ 0.85
TMEM56Q96MV1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM56Q96MV1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM56Q96MV1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM56Q96MV1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.33■□□□□ 0.84
TMEM56Q96MV1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
TMEM56Q96MV1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 SUZ12P1-203ENST00000578195 985 ntBASIC20.32■□□□□ 0.84
TMEM56Q96MV1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM56Q96MV1 LINC00273-201ENST00000539813 1452 ntBASIC20.31■□□□□ 0.84
TMEM56Q96MV1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.31■□□□□ 0.84
TMEM56Q96MV1 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.31■□□□□ 0.84
TMEM56Q96MV1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM56Q96MV1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TMEM56Q96MV1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM56Q96MV1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM56Q96MV1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEM56Q96MV1 AC093323.1-202ENST00000635031 2045 ntBASIC20.29■□□□□ 0.84
TMEM56Q96MV1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM56Q96MV1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms