Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HIST1H1AQ02539 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1AQ02539 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1AQ02539 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1AQ02539 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H1AQ02539 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HIST1H1AQ02539 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.85■□□□□ 0.61
HIST1H1AQ02539 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1AQ02539 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.84■□□□□ 0.61
HIST1H1AQ02539 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HIST1H1AQ02539 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1AQ02539 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H1AQ02539 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H1AQ02539 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H1AQ02539 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H1AQ02539 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.83■□□□□ 0.6
HIST1H1AQ02539 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H1AQ02539 AC018358.1-201ENST00000631079 1402 ntBASIC18.83■□□□□ 0.6
HIST1H1AQ02539 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1AQ02539 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H1AQ02539 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1AQ02539 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1AQ02539 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1AQ02539 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1AQ02539 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST1H1AQ02539 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1AQ02539 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.81■□□□□ 0.6
HIST1H1AQ02539 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H1AQ02539 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H1AQ02539 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H1AQ02539 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HIST1H1AQ02539 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H1AQ02539 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1AQ02539 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HIST1H1AQ02539 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HIST1H1AQ02539 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIST1H1AQ02539 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HIST1H1AQ02539 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.78■□□□□ 0.6
HIST1H1AQ02539 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H1AQ02539 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H1AQ02539 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HIST1H1AQ02539 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H1AQ02539 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H1AQ02539 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
HIST1H1AQ02539 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.77■□□□□ 0.6
HIST1H1AQ02539 DUX4L29-201ENST00000425409 679 ntBASIC18.77■□□□□ 0.6
HIST1H1AQ02539 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H1AQ02539 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST1H1AQ02539 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 AC021231.2-201ENST00000594613 730 ntBASIC18.76■□□□□ 0.59
HIST1H1AQ02539 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H1AQ02539 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST1H1AQ02539 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST1H1AQ02539 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.75■□□□□ 0.59
HIST1H1AQ02539 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.75■□□□□ 0.59
HIST1H1AQ02539 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
HIST1H1AQ02539 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.75■□□□□ 0.59
HIST1H1AQ02539 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H1AQ02539 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HIST1H1AQ02539 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H1AQ02539 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.73■□□□□ 0.59
HIST1H1AQ02539 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
HIST1H1AQ02539 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1AQ02539 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H1AQ02539 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.73■□□□□ 0.59
HIST1H1AQ02539 AC110285.7-201ENST00000624417 1536 ntBASIC18.73■□□□□ 0.59
HIST1H1AQ02539 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1AQ02539 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1AQ02539 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1AQ02539 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1AQ02539 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1AQ02539 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1AQ02539 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H1AQ02539 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H1AQ02539 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
HIST1H1AQ02539 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
HIST1H1AQ02539 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST1H1AQ02539 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms