Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.22■■■□□ 2.27
ALDH1A1P00352 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
ALDH1A1P00352 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
ALDH1A1P00352 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC29.21■■■□□ 2.27
ALDH1A1P00352 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ALDH1A1P00352 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
ALDH1A1P00352 RAP2CP1-202ENST00000605179 643 ntBASIC29.21■■■□□ 2.27
ALDH1A1P00352 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC29.21■■■□□ 2.27
ALDH1A1P00352 MIR6765-201ENST00000614092 87 ntBASIC29.21■■■□□ 2.27
ALDH1A1P00352 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
ALDH1A1P00352 AL359258.2-201ENST00000564063 1566 ntBASIC29.21■■■□□ 2.27
ALDH1A1P00352 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
ALDH1A1P00352 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
ALDH1A1P00352 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
ALDH1A1P00352 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ALDH1A1P00352 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC29.2■■■□□ 2.26
ALDH1A1P00352 AC093536.1-201ENST00000569153 554 ntBASIC29.2■■■□□ 2.26
ALDH1A1P00352 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
ALDH1A1P00352 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC29.2■■■□□ 2.26
ALDH1A1P00352 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
ALDH1A1P00352 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
ALDH1A1P00352 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.19■■■□□ 2.26
ALDH1A1P00352 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
ALDH1A1P00352 SPCS2P3-201ENST00000500401 656 ntBASIC29.19■■■□□ 2.26
ALDH1A1P00352 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.19■■■□□ 2.26
ALDH1A1P00352 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC29.19■■■□□ 2.26
ALDH1A1P00352 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
ALDH1A1P00352 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.18■■■□□ 2.26
ALDH1A1P00352 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC29.18■■■□□ 2.26
ALDH1A1P00352 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
ALDH1A1P00352 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
ALDH1A1P00352 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
ALDH1A1P00352 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
ALDH1A1P00352 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
ALDH1A1P00352 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
ALDH1A1P00352 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC29.16■■■□□ 2.26
ALDH1A1P00352 MIR4508-201ENST00000584178 70 ntBASIC29.16■■■□□ 2.26
ALDH1A1P00352 AL135925.1-201ENST00000605920 1701 ntBASIC29.16■■■□□ 2.26
ALDH1A1P00352 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC29.15■■■□□ 2.26
ALDH1A1P00352 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC29.15■■■□□ 2.26
ALDH1A1P00352 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
ALDH1A1P00352 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
ALDH1A1P00352 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
ALDH1A1P00352 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
ALDH1A1P00352 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.14■■■□□ 2.26
ALDH1A1P00352 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC29.13■■■□□ 2.25
ALDH1A1P00352 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
ALDH1A1P00352 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.13■■■□□ 2.25
ALDH1A1P00352 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.13■■■□□ 2.25
ALDH1A1P00352 AL356441.2-201ENST00000443009 864 ntBASIC29.12■■■□□ 2.25
ALDH1A1P00352 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ALDH1A1P00352 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
ALDH1A1P00352 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC29.12■■■□□ 2.25
ALDH1A1P00352 MIR935-201ENST00000401179 91 ntBASIC29.11■■■□□ 2.25
ALDH1A1P00352 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC29.11■■■□□ 2.25
ALDH1A1P00352 AC018755.3-202ENST00000596210 929 ntBASIC29.11■■■□□ 2.25
ALDH1A1P00352 PVT1_1.1-201ENST00000615125 194 ntBASIC29.11■■■□□ 2.25
ALDH1A1P00352 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
ALDH1A1P00352 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
ALDH1A1P00352 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
ALDH1A1P00352 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC29.1■■■□□ 2.25
ALDH1A1P00352 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
ALDH1A1P00352 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
ALDH1A1P00352 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
ALDH1A1P00352 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.09■■■□□ 2.25
ALDH1A1P00352 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC29.09■■■□□ 2.25
ALDH1A1P00352 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.09■■■□□ 2.25
ALDH1A1P00352 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC29.09■■■□□ 2.25
ALDH1A1P00352 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ALDH1A1P00352 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ALDH1A1P00352 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC29.08■■■□□ 2.25
ALDH1A1P00352 MIR3960-201ENST00000583311 91 ntBASIC29.08■■■□□ 2.25
ALDH1A1P00352 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC29.08■■■□□ 2.25
ALDH1A1P00352 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
ALDH1A1P00352 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
ALDH1A1P00352 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC29.07■■■□□ 2.24
ALDH1A1P00352 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
ALDH1A1P00352 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.07■■■□□ 2.24
ALDH1A1P00352 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC29.07■■■□□ 2.24
ALDH1A1P00352 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.07■■■□□ 2.24
ALDH1A1P00352 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.07■■■□□ 2.24
ALDH1A1P00352 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC29.07■■■□□ 2.24
ALDH1A1P00352 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
ALDH1A1P00352 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
ALDH1A1P00352 PRTG-204ENST00000561292 833 ntTSL 3 BASIC29.06■■■□□ 2.24
ALDH1A1P00352 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC29.06■■■□□ 2.24
ALDH1A1P00352 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC29.05■■■□□ 2.24
ALDH1A1P00352 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
ALDH1A1P00352 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
ALDH1A1P00352 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
ALDH1A1P00352 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
ALDH1A1P00352 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC29.04■■■□□ 2.24
ALDH1A1P00352 AL031848.2-201ENST00000607670 837 ntBASIC29.04■■■□□ 2.24
ALDH1A1P00352 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.04■■■□□ 2.24
ALDH1A1P00352 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC29.03■■■□□ 2.24
ALDH1A1P00352 IDNK-201ENST00000376417 511 ntTSL 5 BASIC29.03■■■□□ 2.24
ALDH1A1P00352 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
ALDH1A1P00352 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
ALDH1A1P00352 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.03■■■□□ 2.24
ALDH1A1P00352 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC29.02■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms