Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CUBNO60494 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CUBNO60494 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CUBNO60494 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CUBNO60494 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.33■□□□□ 0.85
CUBNO60494 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CUBNO60494 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.33■□□□□ 0.84
CUBNO60494 AC025884.2-201ENST00000553429 711 ntBASIC20.32■□□□□ 0.84
CUBNO60494 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CUBNO60494 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.32■□□□□ 0.84
CUBNO60494 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUBNO60494 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CUBNO60494 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.31■□□□□ 0.84
CUBNO60494 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUBNO60494 AC103724.3-201ENST00000564481 992 ntBASIC20.31■□□□□ 0.84
CUBNO60494 PVT1_1.1-201ENST00000615125 194 ntBASIC20.31■□□□□ 0.84
CUBNO60494 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CUBNO60494 AC100797.4-201ENST00000631653 1827 ntBASIC20.31■□□□□ 0.84
CUBNO60494 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.3■□□□□ 0.84
CUBNO60494 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.3■□□□□ 0.84
CUBNO60494 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.3■□□□□ 0.84
CUBNO60494 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CUBNO60494 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.3■□□□□ 0.84
CUBNO60494 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CUBNO60494 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CUBNO60494 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CUBNO60494 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CUBNO60494 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.29■□□□□ 0.84
CUBNO60494 AC126177.7-201ENST00000547904 679 ntBASIC20.29■□□□□ 0.84
CUBNO60494 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CUBNO60494 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CUBNO60494 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.28■□□□□ 0.84
CUBNO60494 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CUBNO60494 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.28■□□□□ 0.84
CUBNO60494 SMPD5-203ENST00000639008 1464 ntBASIC20.27■□□□□ 0.84
CUBNO60494 AL135925.1-201ENST00000605920 1701 ntBASIC20.27■□□□□ 0.84
CUBNO60494 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CUBNO60494 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.27■□□□□ 0.83
CUBNO60494 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.26■□□□□ 0.83
CUBNO60494 RAP2CP1-202ENST00000605179 643 ntBASIC20.26■□□□□ 0.83
CUBNO60494 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CUBNO60494 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUBNO60494 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CUBNO60494 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CUBNO60494 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.25■□□□□ 0.83
CUBNO60494 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CUBNO60494 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CUBNO60494 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.25■□□□□ 0.83
CUBNO60494 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CUBNO60494 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CUBNO60494 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CUBNO60494 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CUBNO60494 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.25■□□□□ 0.83
CUBNO60494 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CUBNO60494 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.24■□□□□ 0.83
CUBNO60494 BHLHE23-202ENST00000612929 1109 ntBASIC20.24■□□□□ 0.83
CUBNO60494 MIR6765-201ENST00000614092 87 ntBASIC20.24■□□□□ 0.83
CUBNO60494 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.24■□□□□ 0.83
CUBNO60494 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
CUBNO60494 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.24■□□□□ 0.83
CUBNO60494 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CUBNO60494 MIR4508-201ENST00000584178 70 ntBASIC20.23■□□□□ 0.83
CUBNO60494 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CUBNO60494 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CUBNO60494 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.23■□□□□ 0.83
CUBNO60494 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.23■□□□□ 0.83
CUBNO60494 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.23■□□□□ 0.83
CUBNO60494 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CUBNO60494 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.23■□□□□ 0.83
CUBNO60494 AL356441.2-201ENST00000443009 864 ntBASIC20.23■□□□□ 0.83
CUBNO60494 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CUBNO60494 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.22■□□□□ 0.83
CUBNO60494 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CUBNO60494 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.22■□□□□ 0.83
CUBNO60494 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CUBNO60494 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CUBNO60494 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CUBNO60494 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CUBNO60494 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CUBNO60494 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CUBNO60494 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CUBNO60494 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.2■□□□□ 0.82
CUBNO60494 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CUBNO60494 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.2■□□□□ 0.82
CUBNO60494 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CUBNO60494 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CUBNO60494 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.19■□□□□ 0.82
CUBNO60494 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.19■□□□□ 0.82
CUBNO60494 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CUBNO60494 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
CUBNO60494 MIR638-201ENST00000385237 100 ntBASIC20.19■□□□□ 0.82
CUBNO60494 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CUBNO60494 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CUBNO60494 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CUBNO60494 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.18■□□□□ 0.82
CUBNO60494 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.18■□□□□ 0.82
CUBNO60494 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CUBNO60494 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CUBNO60494 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.17■□□□□ 0.82
CUBNO60494 AC239859.2-201ENST00000444165 318 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms