Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.08■□□□□ 0.16
SFTPBP07988 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SFTPBP07988 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
SFTPBP07988 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SFTPBP07988 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SFTPBP07988 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 TSPY15P-201ENST00000457163 923 ntBASIC16.07■□□□□ 0.16
SFTPBP07988 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.07■□□□□ 0.16
SFTPBP07988 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SFTPBP07988 AC073195.1-201ENST00000607241 877 ntBASIC16.07■□□□□ 0.16
SFTPBP07988 AL445675.2-201ENST00000620291 557 ntBASIC16.07■□□□□ 0.16
SFTPBP07988 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SFTPBP07988 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.07■□□□□ 0.16
SFTPBP07988 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.07■□□□□ 0.16
SFTPBP07988 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.07■□□□□ 0.16
SFTPBP07988 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SFTPBP07988 CROCCP1-201ENST00000426910 5675 ntBASIC16.07■□□□□ 0.16
SFTPBP07988 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.06■□□□□ 0.16
SFTPBP07988 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
SFTPBP07988 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.06■□□□□ 0.16
SFTPBP07988 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.06■□□□□ 0.16
SFTPBP07988 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.06■□□□□ 0.16
SFTPBP07988 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.06■□□□□ 0.16
SFTPBP07988 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.06■□□□□ 0.16
SFTPBP07988 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.06■□□□□ 0.16
SFTPBP07988 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.06■□□□□ 0.16
SFTPBP07988 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 AC026471.5-201ENST00000615068 467 ntBASIC16.06■□□□□ 0.16
SFTPBP07988 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SFTPBP07988 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SFTPBP07988 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.06■□□□□ 0.16
SFTPBP07988 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.06■□□□□ 0.16
SFTPBP07988 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.06■□□□□ 0.16
SFTPBP07988 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.05■□□□□ 0.16
SFTPBP07988 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.05■□□□□ 0.16
SFTPBP07988 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.05■□□□□ 0.16
SFTPBP07988 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.05■□□□□ 0.16
SFTPBP07988 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.05■□□□□ 0.16
SFTPBP07988 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.05■□□□□ 0.16
SFTPBP07988 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 NIFKP9-201ENST00000419265 221 ntBASIC16.05■□□□□ 0.16
SFTPBP07988 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.05■□□□□ 0.16
SFTPBP07988 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 AL355355.2-201ENST00000442321 338 ntBASIC16.05■□□□□ 0.16
SFTPBP07988 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.05■□□□□ 0.16
SFTPBP07988 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SFTPBP07988 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.05■□□□□ 0.16
SFTPBP07988 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.05■□□□□ 0.16
SFTPBP07988 AP003071.4-201ENST00000562276 1284 ntBASIC16.05■□□□□ 0.16
SFTPBP07988 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 CR392000.1-201ENST00000624770 1228 ntBASIC16.05■□□□□ 0.16
SFTPBP07988 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SFTPBP07988 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SFTPBP07988 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms