RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 NISCHQ9Y2I1 1504 aa32.28■■■□□ 2.76
TCF4-201ENST00000354452 SUPT5HO00267 1087 aaKnown RBP29.89■■■□□ 2.38
TCF4-201ENST00000354452 SHROOM4Q9ULL8 1493 aa29.84■■■□□ 2.37
TCF4-201ENST00000354452 HRCP23327 699 aa29.47■■■□□ 2.31
TCF4-201ENST00000354452 PCGF6Q9BYE7 350 aa29.46■■■□□ 2.31
TCF4-201ENST00000354452 PPARGC1BQ86YN6 1023 aaKnown RBP29.27■■■□□ 2.28
TCF4-201ENST00000354452 DCAF8L2P0C7V8 631 aa28.78■■■□□ 2.2
TCF4-201ENST00000354452 CHIC1Q5VXU3 224 aa28.7■■■□□ 2.18
TCF4-201ENST00000354452 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
TCF4-201ENST00000354452 LOC105371045A0A1W2PR82 267 aa28.44■■■□□ 2.14
TCF4-201ENST00000354452 PELP1Q8IZL8 1130 aaKnown RBP28.36■■■□□ 2.13
TCF4-201ENST00000354452 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
TCF4-201ENST00000354452 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
TCF4-201ENST00000354452 SCAF1Q9H7N4 1312 aaKnown RBP27.91■■■□□ 2.06
TCF4-201ENST00000354452 ZEB1P37275 1124 aaPredicted RBP27.86■■■□□ 2.05
TCF4-201ENST00000354452 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
TCF4-201ENST00000354452 DCAF1Q9Y4B6 1507 aa27.65■■■□□ 2.02
TCF4-201ENST00000354452 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
TCF4-201ENST00000354452 CCER1Q8TC90 406 aaPredicted RBP27.37■■□□□ 1.97
TCF4-201ENST00000354452 GTF3C3Q9Y5Q9 886 aa27.35■■□□□ 1.97
TCF4-201ENST00000354452 TTBK1Q5TCY1 1321 aaPredicted RBP27.34■■□□□ 1.97
TCF4-201ENST00000354452 CENPBP07199 599 aaPredicted RBP27.32■■□□□ 1.96
TCF4-201ENST00000354452 NEUROD1Q13562 356 aa27.31■■□□□ 1.96
TCF4-201ENST00000354452 ACIN1Q9UKV3 1341 aaKnown RBP27.31■■□□□ 1.96
TCF4-201ENST00000354452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.31■■□□□ 1.96
TCF4-201ENST00000354452 ZCCHC6Q5VYS8 1495 aaKnown RBP27.29■■□□□ 1.96
TCF4-201ENST00000354452 MYT1Q01538 1121 aa27.2■■□□□ 1.95
TCF4-201ENST00000354452 YTHDC1Q96MU7 727 aaKnown RBP27.19■■□□□ 1.94
TCF4-201ENST00000354452 CCDC180Q9P1Z9 1646 aa27.13■■□□□ 1.93
TCF4-201ENST00000354452 DIEXFQ68CQ4 756 aaKnown RBP27.11■■□□□ 1.93
TCF4-201ENST00000354452 ZNF316A6NFI3 1004 aaPredicted RBP26.45■■□□□ 1.82
TCF4-201ENST00000354452 MIER1Q8N108 512 aa26.34■■□□□ 1.81
TCF4-201ENST00000354452 HNRNPUL2Q1KMD3 747 aaKnown RBP26.33■■□□□ 1.81
TCF4-201ENST00000354452 UBTFP17480 764 aaKnown RBP26.27■■□□□ 1.8
TCF4-201ENST00000354452 RSF1Q96T23 1441 aaPredicted RBP26.2■■□□□ 1.79
TCF4-201ENST00000354452 RANGAP1P46060 587 aaPredicted RBP26.15■■□□□ 1.78
TCF4-201ENST00000354452 APLP2Q06481 763 aa25.98■■□□□ 1.75
TCF4-201ENST00000354452 RB1CC1Q8TDY2 1594 aa25.98■■□□□ 1.75
TCF4-201ENST00000354452 BCANQ96GW7 911 aa25.93■■□□□ 1.74
TCF4-201ENST00000354452 SCRIBQ14160 1630 aa25.9■■□□□ 1.74
TCF4-201ENST00000354452 ABCC9O60706 1549 aa25.83■■□□□ 1.73
TCF4-201ENST00000354452 SUPT16HQ9Y5B9 1047 aaKnown RBP25.79■■□□□ 1.72
TCF4-201ENST00000354452 CEP162Q5TB80 1403 aa25.7■■□□□ 1.71
TCF4-201ENST00000354452 ANP32EQ9BTT0 268 aa25.7■■□□□ 1.7
TCF4-201ENST00000354452 BCL11AQ9H165 835 aa25.66■■□□□ 1.7
TCF4-201ENST00000354452 CSRNP3Q8WYN3 585 aa25.64■■□□□ 1.7
TCF4-201ENST00000354452 TSHZ2Q9NRE2 1034 aa25.61■■□□□ 1.69
TCF4-201ENST00000354452 CECR2Q9BXF3 1484 aa25.58■■□□□ 1.69
TCF4-201ENST00000354452 ITGAEP38570 1179 aa25.56■■□□□ 1.68
TCF4-201ENST00000354452 NEFLP07196 543 aa25.5■■□□□ 1.67
TCF4-201ENST00000354452 FKBP8Q14318 412 aa25.5■■□□□ 1.67
TCF4-201ENST00000354452 SOGA1O94964 1423 aa25.45■■□□□ 1.66
TCF4-201ENST00000354452 CLSPNQ9HAW4 1339 aa25.42■■□□□ 1.66
TCF4-201ENST00000354452 ERICH6Q7L0X2 663 aa25.4■■□□□ 1.66
TCF4-201ENST00000354452 TNIKQ9UKE5 1360 aa25.39■■□□□ 1.66
TCF4-201ENST00000354452 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
TCF4-201ENST00000354452 MROH2BQ7Z745 1585 aa25.37■■□□□ 1.65
TCF4-201ENST00000354452 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
TCF4-201ENST00000354452 KCNH8Q96L42 1107 aa25.35■■□□□ 1.65
TCF4-201ENST00000354452 ABCC8Q09428 1581 aa25.34■■□□□ 1.65
TCF4-201ENST00000354452 TRIM52Q96A61 297 aa25.23■■□□□ 1.63
TCF4-201ENST00000354452 DDX10Q13206 875 aaKnown RBP25.23■■□□□ 1.63
TCF4-201ENST00000354452 WIZO95785 1651 aa25.22■■□□□ 1.63
TCF4-201ENST00000354452 RUSC2Q8N2Y8 1516 aa25.2■■□□□ 1.63
TCF4-201ENST00000354452 RBM19Q9Y4C8 960 aaKnown RBP25.16■■□□□ 1.62
TCF4-201ENST00000354452 CLIP1P30622 1438 aa25.14■■□□□ 1.62
TCF4-201ENST00000354452 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.62
TCF4-201ENST00000354452 GOLGA3Q08378 1498 aa25.1■■□□□ 1.61
TCF4-201ENST00000354452 IRX6P78412 446 aaPredicted RBP25.03■■□□□ 1.6
TCF4-201ENST00000354452 ATP1B4Q9UN42 357 aaPredicted RBP24.97■■□□□ 1.59
TCF4-201ENST00000354452 EEA1Q15075 1411 aa24.95■■□□□ 1.58
TCF4-201ENST00000354452 DHX57Q6P158 1386 aaKnown RBP24.95■■□□□ 1.58
TCF4-201ENST00000354452 ANP32CO43423 234 aa24.94■■□□□ 1.58
TCF4-201ENST00000354452 CDK11AQ9UQ88 783 aaPredicted RBP24.92■■□□□ 1.58
TCF4-201ENST00000354452 KANK4Q5T7N3 995 aaPredicted RBP24.89■■□□□ 1.58
TCF4-201ENST00000354452 VPS8Q8N3P4 1428 aa24.87■■□□□ 1.57
TCF4-201ENST00000354452 FAM50AQ14320 339 aaKnown RBP24.83■■□□□ 1.57
TCF4-201ENST00000354452 SIN3AQ96ST3 1273 aa24.83■■□□□ 1.57
TCF4-201ENST00000354452 CEP164Q9UPV0 1460 aa24.8■■□□□ 1.56
TCF4-201ENST00000354452 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.56
TCF4-201ENST00000354452 HNRNPUQ00839 825 aaKnown RBP eCLIP24.78■■□□□ 1.56
TCF4-201ENST00000354452 BAZ1AQ9NRL2 1556 aaPredicted RBP24.74■■□□□ 1.55
TCF4-201ENST00000354452 NBR1Q14596 966 aa24.73■■□□□ 1.55
TCF4-201ENST00000354452 MSH5O43196 834 aa24.71■■□□□ 1.55
TCF4-201ENST00000354452 CNGB1Q14028 1251 aaPredicted RBP24.7■■□□□ 1.55
TCF4-201ENST00000354452 RAPGEF2Q9Y4G8 1499 aa24.64■■□□□ 1.54
TCF4-201ENST00000354452 DEKP35659 375 aaKnown RBP24.58■■□□□ 1.52
TCF4-201ENST00000354452 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
TCF4-201ENST00000354452 CCNB3Q8WWL7 1395 aa24.55■■□□□ 1.52
TCF4-201ENST00000354452 RAB3GAP2Q9H2M9 1393 aa24.53■■□□□ 1.52
TCF4-201ENST00000354452 NACADO15069 1562 aa24.52■■□□□ 1.52
TCF4-201ENST00000354452 P3H3Q8IVL6 736 aa24.51■■□□□ 1.51
TCF4-201ENST00000354452 SMARCA2P51531 1590 aa24.51■■□□□ 1.51
TCF4-201ENST00000354452 B4GALNT3Q6L9W6 998 aa24.49■■□□□ 1.51
TCF4-201ENST00000354452 EIF4G1Q04637 1599 aaKnown RBP24.48■■□□□ 1.51
TCF4-201ENST00000354452 FAM9BQ8IZU0 186 aa24.47■■□□□ 1.51
TCF4-201ENST00000354452 RTL5Q5HYW3 569 aaPredicted RBP24.46■■□□□ 1.51
TCF4-201ENST00000354452 CCER2I3L3R5 266 aa24.45■■□□□ 1.5
TCF4-201ENST00000354452 KIF21BO75037 1637 aa24.44■■□□□ 1.5
TCF4-201ENST00000354452 PPP1R15AO75807 674 aaPredicted RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms