Protein–RNA interactions for Protein: Q9UKI3

VPREB3, Pre-B lymphocyte protein 3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3Q9UKI3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 AP002414.4-201ENST00000589764 1148 ntBASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 AL357033.4-201ENST00000617703 1807 ntBASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
VPREB3Q9UKI3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 AC083906.6-201ENST00000641366 219 ntBASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 Z83836.1-201ENST00000624605 1642 ntBASIC14.74□□□□□ -0.05
VPREB3Q9UKI3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 KRT18P1-202ENST00000452408 1331 ntBASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 RNF126P1-202ENST00000569893 925 ntBASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
VPREB3Q9UKI3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms