RNA–Protein interactions for RNA: ENST00000366314.4

LINC00311-201, long intergenic non-protein coding RNA 311, humanhuman

TSL 1 (best) BASIC

Gene LINC00311, Length 1,566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311-201ENST00000366314 NISCHQ9Y2I1 1504 aa43.84■■■■■ 4.61
LINC00311-201ENST00000366314 CCDC180Q9P1Z9 1646 aa38.95■■■■□ 3.83
LINC00311-201ENST00000366314 ABCC9O60706 1549 aa37.83■■■■□ 3.65
LINC00311-201ENST00000366314 ZCCHC6Q5VYS8 1495 aaKnown RBP36.55■■■■□ 3.44
LINC00311-201ENST00000366314 NACADO15069 1562 aa36.55■■■■□ 3.44
LINC00311-201ENST00000366314 RB1CC1Q8TDY2 1594 aa36.55■■■■□ 3.44
LINC00311-201ENST00000366314 DCAF8L2P0C7V8 631 aa36.53■■■■□ 3.44
LINC00311-201ENST00000366314 MYO15BQ96JP2 1530 aa36.39■■■■□ 3.42
LINC00311-201ENST00000366314 DCAF1Q9Y4B6 1507 aa36.3■■■■□ 3.4
LINC00311-201ENST00000366314 UNC13AQ9UPW8 1703 aa35.75■■■■□ 3.31
LINC00311-201ENST00000366314 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
LINC00311-201ENST00000366314 BICRAQ9NZM4 1560 aa35.37■■■■□ 3.25
LINC00311-201ENST00000366314 PABPN1Q86U42 306 aaKnown RBP eCLIP35.35■■■■□ 3.25
LINC00311-201ENST00000366314 SHROOM4Q9ULL8 1493 aa35.09■■■■□ 3.21
LINC00311-201ENST00000366314 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
LINC00311-201ENST00000366314 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.11
LINC00311-201ENST00000366314 CC2D2AQ9P2K1 1620 aa34.27■■■■□ 3.08
LINC00311-201ENST00000366314 CECR2Q9BXF3 1484 aa34.09■■■■□ 3.05
LINC00311-201ENST00000366314 SMARCA4P51532 1647 aa33.99■■■■□ 3.03
LINC00311-201ENST00000366314 BAZ1AQ9NRL2 1556 aaPredicted RBP33.99■■■■□ 3.03
LINC00311-201ENST00000366314 MROH2BQ7Z745 1585 aa33.76■■■■□ 3
LINC00311-201ENST00000366314 SMARCA2P51531 1590 aa33.74■■■□□ 2.99
LINC00311-201ENST00000366314 ATAD2BQ9ULI0 1458 aa33.72■■■□□ 2.99
LINC00311-201ENST00000366314 NCAPD3P42695 1498 aa33.68■■■□□ 2.98
LINC00311-201ENST00000366314 PEG3Q9GZU2 1588 aa33.66■■■□□ 2.98
LINC00311-201ENST00000366314 HMGXB3Q12766 1538 aa33.57■■■□□ 2.96
LINC00311-201ENST00000366314 BAZ1BQ9UIG0 1483 aaKnown RBP33.48■■■□□ 2.95
LINC00311-201ENST00000366314 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.95
LINC00311-201ENST00000366314 WIZO95785 1651 aa33.45■■■□□ 2.94
LINC00311-201ENST00000366314 TOP2AP11388 1531 aaKnown RBP33.1■■■□□ 2.89
LINC00311-201ENST00000366314 LAMC3Q9Y6N6 1575 aa32.81■■■□□ 2.84
LINC00311-201ENST00000366314 NESP48681 1621 aa32.78■■■□□ 2.84
LINC00311-201ENST00000366314 SUPT5HO00267 1087 aaKnown RBP32.76■■■□□ 2.84
LINC00311-201ENST00000366314 CADPSQ9ULU8 1353 aa32.71■■■□□ 2.83
LINC00311-201ENST00000366314 CCDC88BA6NC98 1476 aa32.69■■■□□ 2.82
LINC00311-201ENST00000366314 ERCC6Q03468 1493 aa32.63■■■□□ 2.81
LINC00311-201ENST00000366314 CFTRP13569 1480 aa32.56■■■□□ 2.8
LINC00311-201ENST00000366314 PDS5BQ9NTI5 1447 aa32.56■■■□□ 2.8
LINC00311-201ENST00000366314 KIF21AQ7Z4S6 1674 aa32.47■■■□□ 2.79
LINC00311-201ENST00000366314 PRDM2Q13029 1718 aa32.45■■■□□ 2.78
LINC00311-201ENST00000366314 FANCD2Q9BXW9 1451 aa32.34■■■□□ 2.77
LINC00311-201ENST00000366314 CEP164Q9UPV0 1460 aa32.3■■■□□ 2.76
LINC00311-201ENST00000366314 THOC2Q8NI27 1593 aaKnown RBP32.29■■■□□ 2.76
LINC00311-201ENST00000366314 CUX2O14529 1486 aa32.21■■■□□ 2.75
LINC00311-201ENST00000366314 MRC2Q9UBG0 1479 aa32.2■■■□□ 2.74
LINC00311-201ENST00000366314 WDR62O43379 1518 aa32.09■■■□□ 2.73
LINC00311-201ENST00000366314 URB2Q14146 1524 aaKnown RBP31.99■■■□□ 2.71
LINC00311-201ENST00000366314 ABCC8Q09428 1581 aa31.91■■■□□ 2.7
LINC00311-201ENST00000366314 DNMBPQ6XZF7 1577 aa31.86■■■□□ 2.69
LINC00311-201ENST00000366314 TOPBP1Q92547 1522 aa31.85■■■□□ 2.69
LINC00311-201ENST00000366314 CUX1P39880 1505 aa31.67■■■□□ 2.66
LINC00311-201ENST00000366314 IFT140Q96RY7 1462 aa31.61■■■□□ 2.65
LINC00311-201ENST00000366314 POLA1P09884 1462 aaPredicted RBP31.59■■■□□ 2.65
LINC00311-201ENST00000366314 WRNQ14191 1432 aaPredicted RBP eCLIP31.56■■■□□ 2.64
LINC00311-201ENST00000366314 FGD5Q6ZNL6 1462 aa31.54■■■□□ 2.64
LINC00311-201ENST00000366314 TOP2BQ02880 1626 aa31.5■■■□□ 2.63
LINC00311-201ENST00000366314 TARBP1Q13395 1621 aaKnown RBP31.5■■■□□ 2.63
LINC00311-201ENST00000366314 BIVM-ERCC5R4GMW8 1640 aa31.5■■■□□ 2.63
LINC00311-201ENST00000366314 SOGA1O94964 1423 aa31.46■■■□□ 2.63
LINC00311-201ENST00000366314 SYNJ1O43426 1573 aa31.46■■■□□ 2.63
LINC00311-201ENST00000366314 RAD54L2Q9Y4B4 1467 aa31.42■■■□□ 2.62
LINC00311-201ENST00000366314 ZNF608Q9ULD9 1512 aaPredicted RBP31.4■■■□□ 2.62
LINC00311-201ENST00000366314 EIF4G3O43432 1585 aaKnown RBP31.34■■■□□ 2.61
LINC00311-201ENST00000366314 WDR97A6NE52 1622 aa31.31■■■□□ 2.6
LINC00311-201ENST00000366314 AQRO60306 1485 aaKnown RBP eCLIP31.27■■■□□ 2.6
LINC00311-201ENST00000366314 ABCA10Q8WWZ4 1543 aa31.26■■■□□ 2.6
LINC00311-201ENST00000366314 TDRD9Q8NDG6 1382 aaKnown RBP31.24■■■□□ 2.59
LINC00311-201ENST00000366314 ABCA5Q8WWZ7 1642 aa31.13■■■□□ 2.57
LINC00311-201ENST00000366314 GAPVD1Q14C86 1478 aa31.11■■■□□ 2.57
LINC00311-201ENST00000366314 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
LINC00311-201ENST00000366314 GRIN2BQ13224 1484 aa31.08■■■□□ 2.57
LINC00311-201ENST00000366314 MAGI1Q96QZ7 1491 aaPredicted RBP31■■■□□ 2.55
LINC00311-201ENST00000366314 SNAPC4Q5SXM2 1469 aa30.99■■■□□ 2.55
LINC00311-201ENST00000366314 TRIM41Q8WV44 630 aa30.96■■■□□ 2.55
LINC00311-201ENST00000366314 CHD1O14646 1710 aa30.94■■■□□ 2.54
LINC00311-201ENST00000366314 DNAJC5Q9H3Z4 198 aa30.94■■■□□ 2.54
LINC00311-201ENST00000366314 ERICH3Q5RHP9 1530 aa30.91■■■□□ 2.54
LINC00311-201ENST00000366314 OSCARQ8IYS5 282 aa30.91■■■□□ 2.54
LINC00311-201ENST00000366314 KIF27Q86VH2 1401 aa30.89■■■□□ 2.54
LINC00311-201ENST00000366314 FBLN2P98095 1184 aa30.88■■■□□ 2.53
LINC00311-201ENST00000366314 SYNJ2O15056 1496 aa30.86■■■□□ 2.53
LINC00311-201ENST00000366314 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
LINC00311-201ENST00000366314 ADAMTS12P58397 1594 aa30.81■■■□□ 2.52
LINC00311-201ENST00000366314 FHAD1B1AJZ9 1412 aa30.76■■■□□ 2.51
LINC00311-201ENST00000366314 IGF1RP08069 1367 aa30.71■■■□□ 2.51
LINC00311-201ENST00000366314 CUL7Q14999 1698 aa30.7■■■□□ 2.5
LINC00311-201ENST00000366314 CHIC1Q5VXU3 224 aa30.68■■■□□ 2.5
LINC00311-201ENST00000366314 GRIN2AQ12879 1464 aa30.68■■■□□ 2.5
LINC00311-201ENST00000366314 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
LINC00311-201ENST00000366314 CLASP1Q7Z460 1538 aa30.56■■■□□ 2.48
LINC00311-201ENST00000366314 CARMIL1Q5VZK9 1371 aa30.54■■■□□ 2.48
LINC00311-201ENST00000366314 NUP160Q12769 1436 aa30.52■■■□□ 2.48
LINC00311-201ENST00000366314 CEP170Q5SW79 1584 aa30.51■■■□□ 2.48
LINC00311-201ENST00000366314 EEA1Q15075 1411 aa30.46■■■□□ 2.47
LINC00311-201ENST00000366314 RAPGEF2Q9Y4G8 1499 aa30.41■■■□□ 2.46
LINC00311-201ENST00000366314 ARHGEF11O15085 1522 aa30.4■■■□□ 2.46
LINC00311-201ENST00000366314 RIMBP3CA6NJZ7 1639 aa30.39■■■□□ 2.46
LINC00311-201ENST00000366314 RIMBP3BA6NNM3 1639 aa30.39■■■□□ 2.46
LINC00311-201ENST00000366314 RIMBP3Q9UFD9 1639 aa30.39■■■□□ 2.46
LINC00311-201ENST00000366314 CSRNP3Q8WYN3 585 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms