RNA–Protein interactions for RNA: ENST00000444671.6

PACRGL-203, Transcript of parkin coregulated like, humanhuman

TSL 2 BASIC

Gene PACRGL, Length 1,720 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-203ENST00000444671 NISCHQ9Y2I1 1504 aa44.62■■■■■ 4.73
PACRGL-203ENST00000444671 CCDC180Q9P1Z9 1646 aa39.74■■■■□ 3.95
PACRGL-203ENST00000444671 ABCC9O60706 1549 aa39.22■■■■□ 3.87
PACRGL-203ENST00000444671 RB1CC1Q8TDY2 1594 aa37.56■■■■□ 3.6
PACRGL-203ENST00000444671 NACADO15069 1562 aa37.46■■■■□ 3.59
PACRGL-203ENST00000444671 DCAF8L2P0C7V8 631 aa37.39■■■■□ 3.58
PACRGL-203ENST00000444671 MYO15BQ96JP2 1530 aa37.16■■■■□ 3.54
PACRGL-203ENST00000444671 ZCCHC6Q5VYS8 1495 aaKnown RBP37.1■■■■□ 3.53
PACRGL-203ENST00000444671 DCAF1Q9Y4B6 1507 aa36.89■■■■□ 3.5
PACRGL-203ENST00000444671 UNC13AQ9UPW8 1703 aa36.71■■■■□ 3.47
PACRGL-203ENST00000444671 PABPN1Q86U42 306 aaKnown RBP eCLIP36.63■■■■□ 3.45
PACRGL-203ENST00000444671 BICRAQ9NZM4 1560 aa36.49■■■■□ 3.43
PACRGL-203ENST00000444671 DNAJC5BQ9UF47 199 aa36.37■■■■□ 3.41
PACRGL-203ENST00000444671 SCRIBQ14160 1630 aa36.25■■■■□ 3.39
PACRGL-203ENST00000444671 SHROOM4Q9ULL8 1493 aa36.02■■■■□ 3.36
PACRGL-203ENST00000444671 EIF4G1Q04637 1599 aaKnown RBP35.52■■■■□ 3.28
PACRGL-203ENST00000444671 CC2D2AQ9P2K1 1620 aa35.46■■■■□ 3.27
PACRGL-203ENST00000444671 CECR2Q9BXF3 1484 aa35.27■■■■□ 3.24
PACRGL-203ENST00000444671 SMARCA4P51532 1647 aa34.66■■■■□ 3.14
PACRGL-203ENST00000444671 NCAPD3P42695 1498 aa34.61■■■■□ 3.13
PACRGL-203ENST00000444671 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
PACRGL-203ENST00000444671 BAZ1AQ9NRL2 1556 aaPredicted RBP34.57■■■■□ 3.12
PACRGL-203ENST00000444671 SMARCA2P51531 1590 aa34.48■■■■□ 3.11
PACRGL-203ENST00000444671 MROH2BQ7Z745 1585 aa34.39■■■■□ 3.1
PACRGL-203ENST00000444671 HMGXB3Q12766 1538 aa34.37■■■■□ 3.09
PACRGL-203ENST00000444671 PEG3Q9GZU2 1588 aa34.34■■■■□ 3.09
PACRGL-203ENST00000444671 BAZ1BQ9UIG0 1483 aaKnown RBP34.24■■■■□ 3.07
PACRGL-203ENST00000444671 WIZO95785 1651 aa33.98■■■■□ 3.03
PACRGL-203ENST00000444671 RSF1Q96T23 1441 aaPredicted RBP33.9■■■■□ 3.02
PACRGL-203ENST00000444671 NESP48681 1621 aa33.87■■■■□ 3.01
PACRGL-203ENST00000444671 ERCC6Q03468 1493 aa33.79■■■■□ 3
PACRGL-203ENST00000444671 LAMC3Q9Y6N6 1575 aa33.7■■■□□ 2.99
PACRGL-203ENST00000444671 TOP2AP11388 1531 aaKnown RBP33.59■■■□□ 2.97
PACRGL-203ENST00000444671 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
PACRGL-203ENST00000444671 CUX2O14529 1486 aa33.56■■■□□ 2.96
PACRGL-203ENST00000444671 PDS5BQ9NTI5 1447 aa33.5■■■□□ 2.95
PACRGL-203ENST00000444671 KIF21AQ7Z4S6 1674 aa33.41■■■□□ 2.94
PACRGL-203ENST00000444671 THOC2Q8NI27 1593 aaKnown RBP33.39■■■□□ 2.94
PACRGL-203ENST00000444671 CFTRP13569 1480 aa33.32■■■□□ 2.92
PACRGL-203ENST00000444671 CCDC88BA6NC98 1476 aa33.24■■■□□ 2.91
PACRGL-203ENST00000444671 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
PACRGL-203ENST00000444671 MRC2Q9UBG0 1479 aa33.17■■■□□ 2.9
PACRGL-203ENST00000444671 CEP164Q9UPV0 1460 aa33.14■■■□□ 2.9
PACRGL-203ENST00000444671 WDR62O43379 1518 aa33.07■■■□□ 2.89
PACRGL-203ENST00000444671 PRDM2Q13029 1718 aa32.95■■■□□ 2.87
PACRGL-203ENST00000444671 DNAJC5Q9H3Z4 198 aa32.94■■■□□ 2.86
PACRGL-203ENST00000444671 URB2Q14146 1524 aaKnown RBP32.88■■■□□ 2.85
PACRGL-203ENST00000444671 SUPT5HO00267 1087 aaKnown RBP32.79■■■□□ 2.84
PACRGL-203ENST00000444671 TOPBP1Q92547 1522 aa32.62■■■□□ 2.81
PACRGL-203ENST00000444671 ABCC8Q09428 1581 aa32.57■■■□□ 2.8
PACRGL-203ENST00000444671 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
PACRGL-203ENST00000444671 IFT140Q96RY7 1462 aa32.47■■■□□ 2.79
PACRGL-203ENST00000444671 ZNF608Q9ULD9 1512 aaPredicted RBP32.39■■■□□ 2.78
PACRGL-203ENST00000444671 POLA1P09884 1462 aaPredicted RBP32.32■■■□□ 2.76
PACRGL-203ENST00000444671 TARBP1Q13395 1621 aaKnown RBP32.28■■■□□ 2.76
PACRGL-203ENST00000444671 CUX1P39880 1505 aa32.28■■■□□ 2.76
PACRGL-203ENST00000444671 RAD54L2Q9Y4B4 1467 aa32.21■■■□□ 2.75
PACRGL-203ENST00000444671 EIF4G3O43432 1585 aaKnown RBP32.2■■■□□ 2.74
PACRGL-203ENST00000444671 FGD5Q6ZNL6 1462 aa32.19■■■□□ 2.74
PACRGL-203ENST00000444671 SOGA1O94964 1423 aa32.19■■■□□ 2.74
PACRGL-203ENST00000444671 AQRO60306 1485 aaKnown RBP eCLIP32.17■■■□□ 2.74
PACRGL-203ENST00000444671 OSCARQ8IYS5 282 aa32.14■■■□□ 2.74
PACRGL-203ENST00000444671 TDRD9Q8NDG6 1382 aaKnown RBP32.06■■■□□ 2.72
PACRGL-203ENST00000444671 WDR97A6NE52 1622 aa31.97■■■□□ 2.71
PACRGL-203ENST00000444671 WRNQ14191 1432 aaPredicted RBP eCLIP31.94■■■□□ 2.7
PACRGL-203ENST00000444671 TOP2BQ02880 1626 aa31.89■■■□□ 2.7
PACRGL-203ENST00000444671 ABCA10Q8WWZ4 1543 aa31.87■■■□□ 2.69
PACRGL-203ENST00000444671 SYNJ1O43426 1573 aa31.87■■■□□ 2.69
PACRGL-203ENST00000444671 BIVM-ERCC5R4GMW8 1640 aa31.87■■■□□ 2.69
PACRGL-203ENST00000444671 CHD1O14646 1710 aa31.83■■■□□ 2.69
PACRGL-203ENST00000444671 GRIN2BQ13224 1484 aa31.83■■■□□ 2.69
PACRGL-203ENST00000444671 SNAPC4Q5SXM2 1469 aa31.83■■■□□ 2.69
PACRGL-203ENST00000444671 FBLN2P98095 1184 aa31.81■■■□□ 2.68
PACRGL-203ENST00000444671 GAPVD1Q14C86 1478 aa31.8■■■□□ 2.68
PACRGL-203ENST00000444671 MAGI1Q96QZ7 1491 aaPredicted RBP31.77■■■□□ 2.68
PACRGL-203ENST00000444671 ABCA5Q8WWZ7 1642 aa31.76■■■□□ 2.67
PACRGL-203ENST00000444671 PBRM1Q86U86 1689 aa31.7■■■□□ 2.67
PACRGL-203ENST00000444671 TRIM41Q8WV44 630 aa31.69■■■□□ 2.66
PACRGL-203ENST00000444671 CHMP7Q8WUX9 453 aaPredicted RBP31.68■■■□□ 2.66
PACRGL-203ENST00000444671 SYNJ2O15056 1496 aa31.66■■■□□ 2.66
PACRGL-203ENST00000444671 RIMBP3CA6NJZ7 1639 aa31.64■■■□□ 2.65
PACRGL-203ENST00000444671 RIMBP3BA6NNM3 1639 aa31.64■■■□□ 2.65
PACRGL-203ENST00000444671 RIMBP3Q9UFD9 1639 aa31.64■■■□□ 2.65
PACRGL-203ENST00000444671 ARHGEF11O15085 1522 aa31.61■■■□□ 2.65
PACRGL-203ENST00000444671 CLASP1Q7Z460 1538 aa31.53■■■□□ 2.64
PACRGL-203ENST00000444671 ERICH3Q5RHP9 1530 aa31.47■■■□□ 2.63
PACRGL-203ENST00000444671 ADAMTS12P58397 1594 aa31.47■■■□□ 2.63
PACRGL-203ENST00000444671 GRIN2AQ12879 1464 aa31.43■■■□□ 2.62
PACRGL-203ENST00000444671 FHAD1B1AJZ9 1412 aa31.42■■■□□ 2.62
PACRGL-203ENST00000444671 ARAP1Q96P48 1450 aa31.36■■■□□ 2.61
PACRGL-203ENST00000444671 CYB5RLQ6IPT4 315 aa31.35■■■□□ 2.61
PACRGL-203ENST00000444671 NUP160Q12769 1436 aa31.32■■■□□ 2.6
PACRGL-203ENST00000444671 CEP170Q5SW79 1584 aa31.29■■■□□ 2.6
PACRGL-203ENST00000444671 KIF27Q86VH2 1401 aa31.28■■■□□ 2.6
PACRGL-203ENST00000444671 IGF1RP08069 1367 aa31.25■■■□□ 2.59
PACRGL-203ENST00000444671 SHROOM2Q13796 1616 aa31.1■■■□□ 2.57
PACRGL-203ENST00000444671 CUL7Q14999 1698 aa31.09■■■□□ 2.57
PACRGL-203ENST00000444671 ERCC6L2Q5T890 1561 aa31.09■■■□□ 2.57
PACRGL-203ENST00000444671 CARMIL1Q5VZK9 1371 aa31.03■■■□□ 2.56
PACRGL-203ENST00000444671 RUSC2Q8N2Y8 1516 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms