Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 KRT8P41-201ENST00000533985 1514 ntBASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PNMA6B-201ENST00000538162 1200 ntBASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 SIRPAP1-201ENST00000448467 1770 ntBASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
TMEM56-RWDD3S4R434 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TMEM56-RWDD3S4R434 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 BET1L-207ENST00000529614 560 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 AC060766.5-201ENST00000590539 871 ntBASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 AL121832.2-201ENST00000610979 668 ntBASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 AC080038.1-201ENST00000611274 1154 ntBASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 AC073111.5-205ENST00000641717 521 ntBASIC15.27■□□□□ 0.04
TMEM56-RWDD3S4R434 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TMEM56-RWDD3S4R434 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TMEM56-RWDD3S4R434 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms