RNA–Protein interactions for RNA: ENST00000361523.8

BECN1-201, Transcript of beclin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BECN1, Length 2,112 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-201ENST00000361523 NISCHQ9Y2I1 1504 aa38.85■■■■□ 3.81
BECN1-201ENST00000361523 CCDC180Q9P1Z9 1646 aa33.45■■■□□ 2.95
BECN1-201ENST00000361523 ZCCHC6Q5VYS8 1495 aaKnown RBP32.76■■■□□ 2.84
BECN1-201ENST00000361523 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
BECN1-201ENST00000361523 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
BECN1-201ENST00000361523 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
BECN1-201ENST00000361523 SUPT5HO00267 1087 aaKnown RBP31.55■■■□□ 2.64
BECN1-201ENST00000361523 MYO15BQ96JP2 1530 aa31.36■■■□□ 2.61
BECN1-201ENST00000361523 ABCC9O60706 1549 aa31.11■■■□□ 2.57
BECN1-201ENST00000361523 NACADO15069 1562 aa31■■■□□ 2.55
BECN1-201ENST00000361523 SCRIBQ14160 1630 aa30.99■■■□□ 2.55
BECN1-201ENST00000361523 RB1CC1Q8TDY2 1594 aa30.58■■■□□ 2.49
BECN1-201ENST00000361523 CHIC1Q5VXU3 224 aa30.54■■■□□ 2.48
BECN1-201ENST00000361523 RSF1Q96T23 1441 aaPredicted RBP30.46■■■□□ 2.47
BECN1-201ENST00000361523 CECR2Q9BXF3 1484 aa30.19■■■□□ 2.42
BECN1-201ENST00000361523 MROH2BQ7Z745 1585 aa30.08■■■□□ 2.41
BECN1-201ENST00000361523 UNC13AQ9UPW8 1703 aa30.07■■■□□ 2.4
BECN1-201ENST00000361523 BAZ1AQ9NRL2 1556 aaPredicted RBP29.92■■■□□ 2.38
BECN1-201ENST00000361523 WIZO95785 1651 aa29.9■■■□□ 2.38
BECN1-201ENST00000361523 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
BECN1-201ENST00000361523 BICRAQ9NZM4 1560 aa29.68■■■□□ 2.34
BECN1-201ENST00000361523 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
BECN1-201ENST00000361523 PABPN1Q86U42 306 aaKnown RBP eCLIP29.55■■■□□ 2.32
BECN1-201ENST00000361523 TOP2AP11388 1531 aaKnown RBP29.53■■■□□ 2.32
BECN1-201ENST00000361523 LOC105371045A0A1W2PR82 267 aa29.47■■■□□ 2.31
BECN1-201ENST00000361523 EIF4G1Q04637 1599 aaKnown RBP29.34■■■□□ 2.29
BECN1-201ENST00000361523 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
BECN1-201ENST00000361523 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
BECN1-201ENST00000361523 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
BECN1-201ENST00000361523 FAM9AQ8IZU1 332 aaPredicted RBP29.11■■■□□ 2.25
BECN1-201ENST00000361523 ATAD2BQ9ULI0 1458 aa29.04■■■□□ 2.24
BECN1-201ENST00000361523 ABCC8Q09428 1581 aa28.97■■■□□ 2.23
BECN1-201ENST00000361523 PCGF6Q9BYE7 350 aa28.93■■■□□ 2.22
BECN1-201ENST00000361523 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
BECN1-201ENST00000361523 EHMT2Q96KQ7 1210 aa28.74■■■□□ 2.19
BECN1-201ENST00000361523 TRIM26Q12899 539 aaPredicted RBP28.67■■■□□ 2.18
BECN1-201ENST00000361523 HRCP23327 699 aa28.66■■■□□ 2.18
BECN1-201ENST00000361523 WRNQ14191 1432 aaPredicted RBP eCLIP28.65■■■□□ 2.18
BECN1-201ENST00000361523 NCAPD3P42695 1498 aa28.63■■■□□ 2.17
BECN1-201ENST00000361523 HMGXB3Q12766 1538 aa28.63■■■□□ 2.17
BECN1-201ENST00000361523 SOGA1O94964 1423 aa28.59■■■□□ 2.17
BECN1-201ENST00000361523 EEA1Q15075 1411 aa28.58■■■□□ 2.17
BECN1-201ENST00000361523 SYNJ1O43426 1573 aa28.51■■■□□ 2.15
BECN1-201ENST00000361523 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.14
BECN1-201ENST00000361523 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
BECN1-201ENST00000361523 TNIKQ9UKE5 1360 aa28.33■■■□□ 2.13
BECN1-201ENST00000361523 TOP2BQ02880 1626 aa28.3■■■□□ 2.12
BECN1-201ENST00000361523 GOLGA3Q08378 1498 aa28.27■■■□□ 2.12
BECN1-201ENST00000361523 CEP162Q5TB80 1403 aa28.26■■■□□ 2.11
BECN1-201ENST00000361523 BIVM-ERCC5R4GMW8 1640 aa28.24■■■□□ 2.11
BECN1-201ENST00000361523 CFTRP13569 1480 aa28.22■■■□□ 2.11
BECN1-201ENST00000361523 UBTFP17480 764 aaKnown RBP28.21■■■□□ 2.11
BECN1-201ENST00000361523 KIF21BO75037 1637 aa28.19■■■□□ 2.1
BECN1-201ENST00000361523 CEP164Q9UPV0 1460 aa28.18■■■□□ 2.1
BECN1-201ENST00000361523 CC2D2AQ9P2K1 1620 aa28.13■■■□□ 2.09
BECN1-201ENST00000361523 PRDM2Q13029 1718 aa28.11■■■□□ 2.09
BECN1-201ENST00000361523 PPARGC1BQ86YN6 1023 aaKnown RBP28.07■■■□□ 2.08
BECN1-201ENST00000361523 CUX1P39880 1505 aa28.07■■■□□ 2.08
BECN1-201ENST00000361523 CADPSQ9ULU8 1353 aa27.99■■■□□ 2.07
BECN1-201ENST00000361523 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.06
BECN1-201ENST00000361523 ZEB1P37275 1124 aaPredicted RBP27.89■■■□□ 2.05
BECN1-201ENST00000361523 CLIP1P30622 1438 aa27.87■■■□□ 2.05
BECN1-201ENST00000361523 ERICH3Q5RHP9 1530 aa27.85■■■□□ 2.05
BECN1-201ENST00000361523 KIF27Q86VH2 1401 aa27.85■■■□□ 2.05
BECN1-201ENST00000361523 PRXQ9BXM0 1461 aa27.84■■■□□ 2.05
BECN1-201ENST00000361523 VPS8Q8N3P4 1428 aa27.71■■■□□ 2.03
BECN1-201ENST00000361523 TTBK1Q5TCY1 1321 aaPredicted RBP27.7■■■□□ 2.02
BECN1-201ENST00000361523 FANCD2Q9BXW9 1451 aa27.69■■■□□ 2.02
BECN1-201ENST00000361523 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.02
BECN1-201ENST00000361523 CUX2O14529 1486 aa27.63■■■□□ 2.01
BECN1-201ENST00000361523 RANGAP1P46060 587 aaPredicted RBP27.59■■■□□ 2.01
BECN1-201ENST00000361523 NESP48681 1621 aa27.56■■■□□ 2
BECN1-201ENST00000361523 IGF1RP08069 1367 aa27.55■■■□□ 2
BECN1-201ENST00000361523 DNMBPQ6XZF7 1577 aa27.54■■■□□ 2
BECN1-201ENST00000361523 APLP2Q06481 763 aa27.53■■■□□ 2
BECN1-201ENST00000361523 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
BECN1-201ENST00000361523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.49■■□□□ 1.99
BECN1-201ENST00000361523 ARAP1Q96P48 1450 aa27.48■■□□□ 1.99
BECN1-201ENST00000361523 TOPBP1Q92547 1522 aa27.46■■□□□ 1.99
BECN1-201ENST00000361523 CCER1Q8TC90 406 aaPredicted RBP27.45■■□□□ 1.98
BECN1-201ENST00000361523 CARMIL1Q5VZK9 1371 aa27.42■■□□□ 1.98
BECN1-201ENST00000361523 POLA1P09884 1462 aaPredicted RBP27.41■■□□□ 1.98
BECN1-201ENST00000361523 ABCA10Q8WWZ4 1543 aa27.38■■□□□ 1.97
BECN1-201ENST00000361523 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
BECN1-201ENST00000361523 ARHGAP35Q9NRY4 1499 aa27.35■■□□□ 1.97
BECN1-201ENST00000361523 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.96
BECN1-201ENST00000361523 DNAJC5BQ9UF47 199 aa27.3■■□□□ 1.96
BECN1-201ENST00000361523 URB2Q14146 1524 aaKnown RBP27.3■■□□□ 1.96
BECN1-201ENST00000361523 WDR97A6NE52 1622 aa27.21■■□□□ 1.95
BECN1-201ENST00000361523 CUL7Q14999 1698 aa27.21■■□□□ 1.95
BECN1-201ENST00000361523 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.95
BECN1-201ENST00000361523 HNRNPUL2Q1KMD3 747 aaKnown RBP27.18■■□□□ 1.94
BECN1-201ENST00000361523 KANK4Q5T7N3 995 aaPredicted RBP27.16■■□□□ 1.94
BECN1-201ENST00000361523 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
BECN1-201ENST00000361523 CTTNBP2Q8WZ74 1663 aa27.05■■□□□ 1.92
BECN1-201ENST00000361523 TDRD9Q8NDG6 1382 aaKnown RBP27.04■■□□□ 1.92
BECN1-201ENST00000361523 MAP3K1Q13233 1512 aa27.04■■□□□ 1.92
BECN1-201ENST00000361523 GAPVD1Q14C86 1478 aa27.04■■□□□ 1.92
BECN1-201ENST00000361523 FHAD1B1AJZ9 1412 aa27.02■■□□□ 1.92
BECN1-201ENST00000361523 RRBP1Q9P2E9 1410 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms