RNA–Protein interactions for RNA: ENST00000204549.8

PDCD7-201, Transcript of programmed cell death 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PDCD7, Length 2,851 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD7-201ENST00000204549 NISCHQ9Y2I1 1504 aa35.3■■■■□ 3.24
PDCD7-201ENST00000204549 SHROOM4Q9ULL8 1493 aa30.95■■■□□ 2.55
PDCD7-201ENST00000204549 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
PDCD7-201ENST00000204549 ZCCHC6Q5VYS8 1495 aaKnown RBP29.93■■■□□ 2.38
PDCD7-201ENST00000204549 MYO15BQ96JP2 1530 aa29.83■■■□□ 2.37
PDCD7-201ENST00000204549 CHIC1Q5VXU3 224 aa29.76■■■□□ 2.35
PDCD7-201ENST00000204549 HRCP23327 699 aa29.69■■■□□ 2.34
PDCD7-201ENST00000204549 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
PDCD7-201ENST00000204549 CCDC180Q9P1Z9 1646 aa29.55■■■□□ 2.32
PDCD7-201ENST00000204549 PCGF6Q9BYE7 350 aa29.52■■■□□ 2.32
PDCD7-201ENST00000204549 PPARGC1BQ86YN6 1023 aaKnown RBP29.27■■■□□ 2.28
PDCD7-201ENST00000204549 LOC105371045A0A1W2PR82 267 aa29.1■■■□□ 2.25
PDCD7-201ENST00000204549 DCAF1Q9Y4B6 1507 aa28.89■■■□□ 2.22
PDCD7-201ENST00000204549 TRIM26Q12899 539 aaPredicted RBP28.63■■■□□ 2.17
PDCD7-201ENST00000204549 ABCC9O60706 1549 aa28.34■■■□□ 2.13
PDCD7-201ENST00000204549 FAM9AQ8IZU1 332 aaPredicted RBP28.3■■■□□ 2.12
PDCD7-201ENST00000204549 TRIM41Q8WV44 630 aa28.27■■■□□ 2.12
PDCD7-201ENST00000204549 EHMT2Q96KQ7 1210 aa28.25■■■□□ 2.11
PDCD7-201ENST00000204549 RSF1Q96T23 1441 aaPredicted RBP28.22■■■□□ 2.11
PDCD7-201ENST00000204549 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
PDCD7-201ENST00000204549 ZEB1P37275 1124 aaPredicted RBP28.09■■■□□ 2.09
PDCD7-201ENST00000204549 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
PDCD7-201ENST00000204549 SCAF1Q9H7N4 1312 aaKnown RBP27.79■■■□□ 2.04
PDCD7-201ENST00000204549 CECR2Q9BXF3 1484 aa27.7■■■□□ 2.02
PDCD7-201ENST00000204549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
PDCD7-201ENST00000204549 MROH2BQ7Z745 1585 aa27.59■■■□□ 2.01
PDCD7-201ENST00000204549 PELP1Q8IZL8 1130 aaKnown RBP27.5■■□□□ 1.99
PDCD7-201ENST00000204549 CCER1Q8TC90 406 aaPredicted RBP27.49■■□□□ 1.99
PDCD7-201ENST00000204549 WIZO95785 1651 aa27.48■■□□□ 1.99
PDCD7-201ENST00000204549 TTBK1Q5TCY1 1321 aaPredicted RBP27.43■■□□□ 1.98
PDCD7-201ENST00000204549 NACADO15069 1562 aa27.29■■□□□ 1.96
PDCD7-201ENST00000204549 NEUROD1Q13562 356 aa27.28■■□□□ 1.96
PDCD7-201ENST00000204549 ACIN1Q9UKV3 1341 aaKnown RBP27.26■■□□□ 1.95
PDCD7-201ENST00000204549 DIEXFQ68CQ4 756 aaKnown RBP27.19■■□□□ 1.94
PDCD7-201ENST00000204549 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
PDCD7-201ENST00000204549 EIF4G1Q04637 1599 aaKnown RBP27.15■■□□□ 1.94
PDCD7-201ENST00000204549 ABCC8Q09428 1581 aa27.14■■□□□ 1.94
PDCD7-201ENST00000204549 CCDC88BA6NC98 1476 aa27.11■■□□□ 1.93
PDCD7-201ENST00000204549 GTF3C3Q9Y5Q9 886 aa27.06■■□□□ 1.92
PDCD7-201ENST00000204549 CEP162Q5TB80 1403 aa27.04■■□□□ 1.92
PDCD7-201ENST00000204549 SOGA1O94964 1423 aa26.99■■□□□ 1.91
PDCD7-201ENST00000204549 CENPBP07199 599 aaPredicted RBP26.97■■□□□ 1.91
PDCD7-201ENST00000204549 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.91
PDCD7-201ENST00000204549 UBTFP17480 764 aaKnown RBP26.92■■□□□ 1.9
PDCD7-201ENST00000204549 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.9
PDCD7-201ENST00000204549 RUSC2Q8N2Y8 1516 aa26.86■■□□□ 1.89
PDCD7-201ENST00000204549 TNIKQ9UKE5 1360 aa26.85■■□□□ 1.89
PDCD7-201ENST00000204549 CSRNP3Q8WYN3 585 aa26.83■■□□□ 1.88
PDCD7-201ENST00000204549 SMARCA2P51531 1590 aa26.82■■□□□ 1.88
PDCD7-201ENST00000204549 YTHDC1Q96MU7 727 aaKnown RBP26.79■■□□□ 1.88
PDCD7-201ENST00000204549 ZNF316A6NFI3 1004 aaPredicted RBP26.78■■□□□ 1.88
PDCD7-201ENST00000204549 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
PDCD7-201ENST00000204549 HNRNPUL2Q1KMD3 747 aaKnown RBP26.7■■□□□ 1.87
PDCD7-201ENST00000204549 EEA1Q15075 1411 aa26.63■■□□□ 1.85
PDCD7-201ENST00000204549 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
PDCD7-201ENST00000204549 MIER1Q8N108 512 aa26.59■■□□□ 1.85
PDCD7-201ENST00000204549 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
PDCD7-201ENST00000204549 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
PDCD7-201ENST00000204549 PABPN1Q86U42 306 aaKnown RBP eCLIP26.48■■□□□ 1.83
PDCD7-201ENST00000204549 CLIP1P30622 1438 aa26.42■■□□□ 1.82
PDCD7-201ENST00000204549 CEP164Q9UPV0 1460 aa26.39■■□□□ 1.82
PDCD7-201ENST00000204549 SYNJ1O43426 1573 aa26.37■■□□□ 1.81
PDCD7-201ENST00000204549 APLP2Q06481 763 aa26.35■■□□□ 1.81
PDCD7-201ENST00000204549 VPS8Q8N3P4 1428 aa26.3■■□□□ 1.8
PDCD7-201ENST00000204549 KIF21BO75037 1637 aa26.28■■□□□ 1.8
PDCD7-201ENST00000204549 RAPGEF2Q9Y4G8 1499 aa26.27■■□□□ 1.8
PDCD7-201ENST00000204549 MYT1Q01538 1121 aa26.15■■□□□ 1.78
PDCD7-201ENST00000204549 BICRAQ9NZM4 1560 aa26.14■■□□□ 1.77
PDCD7-201ENST00000204549 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
PDCD7-201ENST00000204549 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
PDCD7-201ENST00000204549 DHX57Q6P158 1386 aaKnown RBP26.03■■□□□ 1.76
PDCD7-201ENST00000204549 ATAD2BQ9ULI0 1458 aa26.01■■□□□ 1.75
PDCD7-201ENST00000204549 KANK4Q5T7N3 995 aaPredicted RBP26.01■■□□□ 1.75
PDCD7-201ENST00000204549 ARAP1Q96P48 1450 aa25.9■■□□□ 1.74
PDCD7-201ENST00000204549 CLSPNQ9HAW4 1339 aa25.89■■□□□ 1.74
PDCD7-201ENST00000204549 SUPT16HQ9Y5B9 1047 aaKnown RBP25.89■■□□□ 1.73
PDCD7-201ENST00000204549 ITGAEP38570 1179 aa25.88■■□□□ 1.73
PDCD7-201ENST00000204549 TOP2BQ02880 1626 aa25.87■■□□□ 1.73
PDCD7-201ENST00000204549 PRXQ9BXM0 1461 aa25.8■■□□□ 1.72
PDCD7-201ENST00000204549 ERICH3Q5RHP9 1530 aa25.75■■□□□ 1.71
PDCD7-201ENST00000204549 KCNH8Q96L42 1107 aa25.74■■□□□ 1.71
PDCD7-201ENST00000204549 RRBP1Q9P2E9 1410 aaKnown RBP25.72■■□□□ 1.71
PDCD7-201ENST00000204549 BIVM-ERCC5R4GMW8 1640 aa25.71■■□□□ 1.71
PDCD7-201ENST00000204549 CCNB3Q8WWL7 1395 aa25.69■■□□□ 1.7
PDCD7-201ENST00000204549 CUX1P39880 1505 aa25.62■■□□□ 1.69
PDCD7-201ENST00000204549 KIF27Q86VH2 1401 aa25.6■■□□□ 1.69
PDCD7-201ENST00000204549 ARHGAP35Q9NRY4 1499 aa25.6■■□□□ 1.69
PDCD7-201ENST00000204549 TSHZ2Q9NRE2 1034 aa25.59■■□□□ 1.69
PDCD7-201ENST00000204549 RAB3GAP2Q9H2M9 1393 aa25.58■■□□□ 1.69
PDCD7-201ENST00000204549 CUX2O14529 1486 aa25.57■■□□□ 1.68
PDCD7-201ENST00000204549 BCANQ96GW7 911 aa25.55■■□□□ 1.68
PDCD7-201ENST00000204549 MAPKBP1O60336 1514 aa25.49■■□□□ 1.67
PDCD7-201ENST00000204549 DDX10Q13206 875 aaKnown RBP25.49■■□□□ 1.67
PDCD7-201ENST00000204549 SIN3AQ96ST3 1273 aa25.48■■□□□ 1.67
PDCD7-201ENST00000204549 FAM50AQ14320 339 aaKnown RBP25.43■■□□□ 1.66
PDCD7-201ENST00000204549 HIRIP3Q9BW71 556 aaPredicted RBP25.43■■□□□ 1.66
PDCD7-201ENST00000204549 FKBP8Q14318 412 aa25.39■■□□□ 1.65
PDCD7-201ENST00000204549 WDR97A6NE52 1622 aa25.38■■□□□ 1.65
PDCD7-201ENST00000204549 SETD5Q9C0A6 1442 aa25.38■■□□□ 1.65
PDCD7-201ENST00000204549 ATP1B4Q9UN42 357 aaPredicted RBP25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms