Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 KRT8P32-201ENST00000512863 1461 ntBASIC19.48■□□□□ 0.71
RFX6Q8HWS3 FSCN1P1-201ENST00000568912 1481 ntBASIC19.48■□□□□ 0.71
RFX6Q8HWS3 HTR7P1-202ENST00000624664 4411 ntBASIC19.48■□□□□ 0.71
RFX6Q8HWS3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RFX6Q8HWS3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 MESTP1-201ENST00000404287 994 ntBASIC19.47■□□□□ 0.71
RFX6Q8HWS3 UBE2SP1-201ENST00000450587 669 ntBASIC19.47■□□□□ 0.71
RFX6Q8HWS3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RFX6Q8HWS3 AC126763.1-201ENST00000552015 2118 ntBASIC19.46■□□□□ 0.71
RFX6Q8HWS3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 AP000692.2-201ENST00000608391 879 ntBASIC19.46■□□□□ 0.71
RFX6Q8HWS3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
RFX6Q8HWS3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFX6Q8HWS3 RPS2P55-201ENST00000397318 883 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms