RNA–Protein interactions for RNA: ENST00000245903.3

CD70-201, Transcript of CD70 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD70, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD70-201ENST00000245903 NISCHQ9Y2I1 1504 aa45.11■■■■■ 4.81
CD70-201ENST00000245903 CCDC180Q9P1Z9 1646 aa39.81■■■■□ 3.96
CD70-201ENST00000245903 ABCC9O60706 1549 aa39.55■■■■□ 3.92
CD70-201ENST00000245903 DCAF8L2P0C7V8 631 aa37.68■■■■□ 3.62
CD70-201ENST00000245903 ZCCHC6Q5VYS8 1495 aaKnown RBP37.62■■■■□ 3.61
CD70-201ENST00000245903 RB1CC1Q8TDY2 1594 aa37.53■■■■□ 3.6
CD70-201ENST00000245903 MYO15BQ96JP2 1530 aa37.5■■■■□ 3.59
CD70-201ENST00000245903 NACADO15069 1562 aa37.5■■■■□ 3.59
CD70-201ENST00000245903 DCAF1Q9Y4B6 1507 aa37.44■■■■□ 3.58
CD70-201ENST00000245903 DNAJC5BQ9UF47 199 aa37.1■■■■□ 3.53
CD70-201ENST00000245903 PABPN1Q86U42 306 aaKnown RBP eCLIP37■■■■□ 3.51
CD70-201ENST00000245903 UNC13AQ9UPW8 1703 aa36.68■■■■□ 3.46
CD70-201ENST00000245903 BICRAQ9NZM4 1560 aa36.49■■■■□ 3.43
CD70-201ENST00000245903 SCRIBQ14160 1630 aa36.28■■■■□ 3.4
CD70-201ENST00000245903 SHROOM4Q9ULL8 1493 aa36.05■■■■□ 3.36
CD70-201ENST00000245903 CC2D2AQ9P2K1 1620 aa35.62■■■■□ 3.29
CD70-201ENST00000245903 EIF4G1Q04637 1599 aaKnown RBP35.55■■■■□ 3.28
CD70-201ENST00000245903 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
CD70-201ENST00000245903 AEBP2Q6ZN18 517 aaPredicted RBP34.99■■■■□ 3.19
CD70-201ENST00000245903 BAZ1AQ9NRL2 1556 aaPredicted RBP34.96■■■■□ 3.19
CD70-201ENST00000245903 SMARCA4P51532 1647 aa34.81■■■■□ 3.16
CD70-201ENST00000245903 MROH2BQ7Z745 1585 aa34.68■■■■□ 3.14
CD70-201ENST00000245903 SMARCA2P51531 1590 aa34.66■■■■□ 3.14
CD70-201ENST00000245903 CHIC1Q5VXU3 224 aa34.66■■■■□ 3.14
CD70-201ENST00000245903 NCAPD3P42695 1498 aa34.65■■■■□ 3.14
CD70-201ENST00000245903 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
CD70-201ENST00000245903 RSF1Q96T23 1441 aaPredicted RBP34.55■■■■□ 3.12
CD70-201ENST00000245903 PEG3Q9GZU2 1588 aa34.54■■■■□ 3.12
CD70-201ENST00000245903 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
CD70-201ENST00000245903 BAZ1BQ9UIG0 1483 aaKnown RBP34.39■■■■□ 3.1
CD70-201ENST00000245903 WIZO95785 1651 aa34.22■■■■□ 3.07
CD70-201ENST00000245903 ERCC6Q03468 1493 aa34.07■■■■□ 3.04
CD70-201ENST00000245903 SUPT5HO00267 1087 aaKnown RBP34.04■■■■□ 3.04
CD70-201ENST00000245903 TOP2AP11388 1531 aaKnown RBP34.04■■■■□ 3.04
CD70-201ENST00000245903 NESP48681 1621 aa34.03■■■■□ 3.04
CD70-201ENST00000245903 CUX2O14529 1486 aa33.82■■■■□ 3.01
CD70-201ENST00000245903 DNAJC5Q9H3Z4 198 aa33.82■■■■□ 3
CD70-201ENST00000245903 CADPSQ9ULU8 1353 aa33.7■■■□□ 2.98
CD70-201ENST00000245903 CCDC88BA6NC98 1476 aa33.67■■■□□ 2.98
CD70-201ENST00000245903 LAMC3Q9Y6N6 1575 aa33.63■■■□□ 2.97
CD70-201ENST00000245903 PDS5BQ9NTI5 1447 aa33.52■■■□□ 2.96
CD70-201ENST00000245903 CFTRP13569 1480 aa33.51■■■□□ 2.96
CD70-201ENST00000245903 KIF21AQ7Z4S6 1674 aa33.45■■■□□ 2.95
CD70-201ENST00000245903 THOC2Q8NI27 1593 aaKnown RBP33.45■■■□□ 2.95
CD70-201ENST00000245903 FANCD2Q9BXW9 1451 aa33.19■■■□□ 2.9
CD70-201ENST00000245903 MRC2Q9UBG0 1479 aa33.19■■■□□ 2.9
CD70-201ENST00000245903 CEP164Q9UPV0 1460 aa33.12■■■□□ 2.89
CD70-201ENST00000245903 WDR62O43379 1518 aa33.04■■■□□ 2.88
CD70-201ENST00000245903 PRDM2Q13029 1718 aa32.95■■■□□ 2.87
CD70-201ENST00000245903 ABCC8Q09428 1581 aa32.91■■■□□ 2.86
CD70-201ENST00000245903 URB2Q14146 1524 aaKnown RBP32.85■■■□□ 2.85
CD70-201ENST00000245903 TOPBP1Q92547 1522 aa32.67■■■□□ 2.82
CD70-201ENST00000245903 DNMBPQ6XZF7 1577 aa32.65■■■□□ 2.82
CD70-201ENST00000245903 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
CD70-201ENST00000245903 TRIM41Q8WV44 630 aa32.55■■■□□ 2.8
CD70-201ENST00000245903 OSCARQ8IYS5 282 aa32.54■■■□□ 2.8
CD70-201ENST00000245903 CUX1P39880 1505 aa32.51■■■□□ 2.79
CD70-201ENST00000245903 IFT140Q96RY7 1462 aa32.48■■■□□ 2.79
CD70-201ENST00000245903 ZNF608Q9ULD9 1512 aaPredicted RBP32.46■■■□□ 2.79
CD70-201ENST00000245903 SOGA1O94964 1423 aa32.43■■■□□ 2.78
CD70-201ENST00000245903 POLA1P09884 1462 aaPredicted RBP32.42■■■□□ 2.78
CD70-201ENST00000245903 FGD5Q6ZNL6 1462 aa32.38■■■□□ 2.77
CD70-201ENST00000245903 TOP2BQ02880 1626 aa32.37■■■□□ 2.77
CD70-201ENST00000245903 BIVM-ERCC5R4GMW8 1640 aa32.29■■■□□ 2.76
CD70-201ENST00000245903 SYNJ1O43426 1573 aa32.27■■■□□ 2.76
CD70-201ENST00000245903 AQRO60306 1485 aaKnown RBP eCLIP32.25■■■□□ 2.75
CD70-201ENST00000245903 RAD54L2Q9Y4B4 1467 aa32.23■■■□□ 2.75
CD70-201ENST00000245903 TARBP1Q13395 1621 aaKnown RBP32.18■■■□□ 2.74
CD70-201ENST00000245903 ABCA10Q8WWZ4 1543 aa32.16■■■□□ 2.74
CD70-201ENST00000245903 EIF4G3O43432 1585 aaKnown RBP32.15■■■□□ 2.74
CD70-201ENST00000245903 WDR97A6NE52 1622 aa32.13■■■□□ 2.73
CD70-201ENST00000245903 TDRD9Q8NDG6 1382 aaKnown RBP32.13■■■□□ 2.73
CD70-201ENST00000245903 FBLN2P98095 1184 aa32.12■■■□□ 2.73
CD70-201ENST00000245903 GAPVD1Q14C86 1478 aa32.01■■■□□ 2.71
CD70-201ENST00000245903 KIF27Q86VH2 1401 aa31.98■■■□□ 2.71
CD70-201ENST00000245903 GRIN2BQ13224 1484 aa31.97■■■□□ 2.71
CD70-201ENST00000245903 RIMBP3CA6NJZ7 1639 aa31.95■■■□□ 2.71
CD70-201ENST00000245903 RIMBP3BA6NNM3 1639 aa31.95■■■□□ 2.71
CD70-201ENST00000245903 RIMBP3Q9UFD9 1639 aa31.95■■■□□ 2.71
CD70-201ENST00000245903 CHD1O14646 1710 aa31.9■■■□□ 2.7
CD70-201ENST00000245903 ARHGEF11O15085 1522 aa31.86■■■□□ 2.69
CD70-201ENST00000245903 CYB5RLQ6IPT4 315 aa31.85■■■□□ 2.69
CD70-201ENST00000245903 MAGI1Q96QZ7 1491 aaPredicted RBP31.84■■■□□ 2.69
CD70-201ENST00000245903 ABCA5Q8WWZ7 1642 aa31.83■■■□□ 2.69
CD70-201ENST00000245903 CHMP7Q8WUX9 453 aaPredicted RBP31.83■■■□□ 2.69
CD70-201ENST00000245903 SNAPC4Q5SXM2 1469 aa31.82■■■□□ 2.68
CD70-201ENST00000245903 ERICH3Q5RHP9 1530 aa31.8■■■□□ 2.68
CD70-201ENST00000245903 IGF1RP08069 1367 aa31.77■■■□□ 2.68
CD70-201ENST00000245903 FHAD1B1AJZ9 1412 aa31.71■■■□□ 2.67
CD70-201ENST00000245903 EEA1Q15075 1411 aa31.7■■■□□ 2.67
CD70-201ENST00000245903 SYNJ2O15056 1496 aa31.69■■■□□ 2.66
CD70-201ENST00000245903 PBRM1Q86U86 1689 aa31.61■■■□□ 2.65
CD70-201ENST00000245903 CARMIL1Q5VZK9 1371 aa31.61■■■□□ 2.65
CD70-201ENST00000245903 CSRNP3Q8WYN3 585 aa31.6■■■□□ 2.65
CD70-201ENST00000245903 ARAP1Q96P48 1450 aa31.59■■■□□ 2.65
CD70-201ENST00000245903 RUSC2Q8N2Y8 1516 aa31.54■■■□□ 2.64
CD70-201ENST00000245903 CLASP1Q7Z460 1538 aa31.52■■■□□ 2.64
CD70-201ENST00000245903 ADAMTS12P58397 1594 aa31.51■■■□□ 2.63
CD70-201ENST00000245903 CUL7Q14999 1698 aa31.49■■■□□ 2.63
CD70-201ENST00000245903 GRIN2AQ12879 1464 aa31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms