Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 OR6D1P-203ENST00000641209 4860 ntBASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
TRGV1A0A0A0MS02 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 ABHD17AP1-201ENST00000358206 933 ntBASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 FAM207BP-201ENST00000447172 505 ntBASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 AC091390.4-202ENST00000476426 537 ntBASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 PRSS44-201ENST00000515154 1146 ntBASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 AP001412.1-201ENST00000608405 714 ntBASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 KRT8P11-201ENST00000409686 1436 ntBASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.61□□□□□ -0.23
TRGV1A0A0A0MS02 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 CD177P1-201ENST00000606252 935 ntBASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 CROCCP3-202ENST00000420820 1947 ntBASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRGV1A0A0A0MS02 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 MIR6786-201ENST00000616843 113 ntBASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRGV1A0A0A0MS02 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms