RNA–Protein interactions for RNA: ENST00000317135.12

LRCH2-201, Transcript of leucine rich repeats and calponin homology domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRCH2, Length 4,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH2-201ENST00000317135 NISCHQ9Y2I1 1504 aa33.25■■■□□ 2.91
LRCH2-201ENST00000317135 DCAF8L2P0C7V8 631 aa31.43■■■□□ 2.62
LRCH2-201ENST00000317135 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
LRCH2-201ENST00000317135 SUPT5HO00267 1087 aaKnown RBP29.79■■■□□ 2.36
LRCH2-201ENST00000317135 ABCC9O60706 1549 aa28.15■■■□□ 2.1
LRCH2-201ENST00000317135 EHMT2Q96KQ7 1210 aa28.03■■■□□ 2.08
LRCH2-201ENST00000317135 CCDC180Q9P1Z9 1646 aa27.94■■■□□ 2.06
LRCH2-201ENST00000317135 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
LRCH2-201ENST00000317135 TRIM41Q8WV44 630 aa27.82■■■□□ 2.04
LRCH2-201ENST00000317135 ZCCHC6Q5VYS8 1495 aaKnown RBP27.67■■■□□ 2.02
LRCH2-201ENST00000317135 APLP2Q06481 763 aa27.49■■□□□ 1.99
LRCH2-201ENST00000317135 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
LRCH2-201ENST00000317135 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
LRCH2-201ENST00000317135 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
LRCH2-201ENST00000317135 SCRIBQ14160 1630 aa27.09■■□□□ 1.93
LRCH2-201ENST00000317135 RANGAP1P46060 587 aaPredicted RBP27.07■■□□□ 1.92
LRCH2-201ENST00000317135 PCGF6Q9BYE7 350 aa27.04■■□□□ 1.92
LRCH2-201ENST00000317135 TTBK1Q5TCY1 1321 aaPredicted RBP26.98■■□□□ 1.91
LRCH2-201ENST00000317135 RB1CC1Q8TDY2 1594 aa26.84■■□□□ 1.89
LRCH2-201ENST00000317135 NACADO15069 1562 aa26.79■■□□□ 1.88
LRCH2-201ENST00000317135 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
LRCH2-201ENST00000317135 LOC105371045A0A1W2PR82 267 aa26.74■■□□□ 1.87
LRCH2-201ENST00000317135 ATP1B4Q9UN42 357 aaPredicted RBP26.72■■□□□ 1.87
LRCH2-201ENST00000317135 ZEB1P37275 1124 aaPredicted RBP26.47■■□□□ 1.83
LRCH2-201ENST00000317135 PPARGC1BQ86YN6 1023 aaKnown RBP26.43■■□□□ 1.82
LRCH2-201ENST00000317135 TRIM26Q12899 539 aaPredicted RBP26.43■■□□□ 1.82
LRCH2-201ENST00000317135 CCER1Q8TC90 406 aaPredicted RBP26.42■■□□□ 1.82
LRCH2-201ENST00000317135 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
LRCH2-201ENST00000317135 MYO15BQ96JP2 1530 aa26.17■■□□□ 1.78
LRCH2-201ENST00000317135 CSRNP3Q8WYN3 585 aa26.08■■□□□ 1.77
LRCH2-201ENST00000317135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.02■■□□□ 1.76
LRCH2-201ENST00000317135 HNRNPUL2Q1KMD3 747 aaKnown RBP26.02■■□□□ 1.76
LRCH2-201ENST00000317135 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
LRCH2-201ENST00000317135 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
LRCH2-201ENST00000317135 ITGAEP38570 1179 aa25.9■■□□□ 1.74
LRCH2-201ENST00000317135 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
LRCH2-201ENST00000317135 HRCP23327 699 aa25.82■■□□□ 1.72
LRCH2-201ENST00000317135 MROH2BQ7Z745 1585 aa25.69■■□□□ 1.7
LRCH2-201ENST00000317135 FBLN2P98095 1184 aa25.68■■□□□ 1.7
LRCH2-201ENST00000317135 WRNQ14191 1432 aaPredicted RBP eCLIP25.57■■□□□ 1.68
LRCH2-201ENST00000317135 FAM50AQ14320 339 aaKnown RBP25.56■■□□□ 1.68
LRCH2-201ENST00000317135 EEA1Q15075 1411 aa25.52■■□□□ 1.68
LRCH2-201ENST00000317135 P3H3Q8IVL6 736 aa25.52■■□□□ 1.68
LRCH2-201ENST00000317135 MYT1LQ9UL68 1186 aa25.52■■□□□ 1.68
LRCH2-201ENST00000317135 PELP1Q8IZL8 1130 aaKnown RBP25.49■■□□□ 1.67
LRCH2-201ENST00000317135 CENPBP07199 599 aaPredicted RBP25.49■■□□□ 1.67
LRCH2-201ENST00000317135 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
LRCH2-201ENST00000317135 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.66
LRCH2-201ENST00000317135 WIZO95785 1651 aa25.32■■□□□ 1.64
LRCH2-201ENST00000317135 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
LRCH2-201ENST00000317135 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
LRCH2-201ENST00000317135 KIF27Q86VH2 1401 aa25.26■■□□□ 1.63
LRCH2-201ENST00000317135 SMARCA4P51532 1647 aa25.25■■□□□ 1.63
LRCH2-201ENST00000317135 CLIP1P30622 1438 aa25.23■■□□□ 1.63
LRCH2-201ENST00000317135 CDK11AQ9UQ88 783 aaPredicted RBP25.22■■□□□ 1.63
LRCH2-201ENST00000317135 ARID3CA6NKF2 412 aa25.2■■□□□ 1.63
LRCH2-201ENST00000317135 TRIM52Q96A61 297 aa25.2■■□□□ 1.63
LRCH2-201ENST00000317135 ATAD2BQ9ULI0 1458 aa25.19■■□□□ 1.62
LRCH2-201ENST00000317135 CEP164Q9UPV0 1460 aa25.15■■□□□ 1.62
LRCH2-201ENST00000317135 CEP162Q5TB80 1403 aa25.13■■□□□ 1.61
LRCH2-201ENST00000317135 TNIKQ9UKE5 1360 aa25.12■■□□□ 1.61
LRCH2-201ENST00000317135 CHMP7Q8WUX9 453 aaPredicted RBP25.11■■□□□ 1.61
LRCH2-201ENST00000317135 YTHDC1Q96MU7 727 aaKnown RBP25.1■■□□□ 1.61
LRCH2-201ENST00000317135 ABCC8Q09428 1581 aa25.04■■□□□ 1.6
LRCH2-201ENST00000317135 SOGA1O94964 1423 aa25.02■■□□□ 1.6
LRCH2-201ENST00000317135 NEUROD1Q13562 356 aa25.02■■□□□ 1.6
LRCH2-201ENST00000317135 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
LRCH2-201ENST00000317135 POLR3GLQ9BT43 218 aa24.97■■□□□ 1.59
LRCH2-201ENST00000317135 CADPSQ9ULU8 1353 aa24.95■■□□□ 1.58
LRCH2-201ENST00000317135 ZNF777Q9ULD5 760 aaPredicted RBP24.94■■□□□ 1.58
LRCH2-201ENST00000317135 PDS5BQ9NTI5 1447 aa24.94■■□□□ 1.58
LRCH2-201ENST00000317135 CUX2O14529 1486 aa24.94■■□□□ 1.58
LRCH2-201ENST00000317135 DIEXFQ68CQ4 756 aaKnown RBP24.9■■□□□ 1.58
LRCH2-201ENST00000317135 MTUS2Q5JR59 1369 aa24.89■■□□□ 1.57
LRCH2-201ENST00000317135 CARMIL1Q5VZK9 1371 aa24.86■■□□□ 1.57
LRCH2-201ENST00000317135 NEFLP07196 543 aa24.84■■□□□ 1.57
LRCH2-201ENST00000317135 NPM1P06748 294 aaKnown RBP eCLIP24.76■■□□□ 1.55
LRCH2-201ENST00000317135 NCAPD3P42695 1498 aa24.75■■□□□ 1.55
LRCH2-201ENST00000317135 EIF4G1Q04637 1599 aaKnown RBP24.73■■□□□ 1.55
LRCH2-201ENST00000317135 ZNF316A6NFI3 1004 aaPredicted RBP24.7■■□□□ 1.55
LRCH2-201ENST00000317135 ZNF326Q5BKZ1 582 aaKnown RBP24.67■■□□□ 1.54
LRCH2-201ENST00000317135 CNGB1Q14028 1251 aaPredicted RBP24.63■■□□□ 1.53
LRCH2-201ENST00000317135 FHAD1B1AJZ9 1412 aa24.62■■□□□ 1.53
LRCH2-201ENST00000317135 CHIC2Q9UKJ5 165 aa24.62■■□□□ 1.53
LRCH2-201ENST00000317135 TDRD9Q8NDG6 1382 aaKnown RBP24.61■■□□□ 1.53
LRCH2-201ENST00000317135 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
LRCH2-201ENST00000317135 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
LRCH2-201ENST00000317135 TSPY4P0CV99 314 aa24.57■■□□□ 1.52
LRCH2-201ENST00000317135 TSPY10P0CW01 314 aa24.57■■□□□ 1.52
LRCH2-201ENST00000317135 VPS8Q8N3P4 1428 aa24.54■■□□□ 1.52
LRCH2-201ENST00000317135 TONSLQ96HA7 1378 aa24.53■■□□□ 1.52
LRCH2-201ENST00000317135 BICRAQ9NZM4 1560 aa24.48■■□□□ 1.51
LRCH2-201ENST00000317135 SLC4A1APQ9BWU0 796 aaKnown RBP24.48■■□□□ 1.51
LRCH2-201ENST00000317135 RAPGEF2Q9Y4G8 1499 aa24.45■■□□□ 1.51
LRCH2-201ENST00000317135 ANP32CO43423 234 aa24.45■■□□□ 1.51
LRCH2-201ENST00000317135 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
LRCH2-201ENST00000317135 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
LRCH2-201ENST00000317135 KCNH8Q96L42 1107 aa24.4■■□□□ 1.5
LRCH2-201ENST00000317135 CFDP1Q9UEE9 299 aaPredicted RBP24.39■■□□□ 1.49
LRCH2-201ENST00000317135 RRP7BPQ9NSQ0 103 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms