RNA–Protein interactions for RNA: ENST00000612396.4

LARP4B-211, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LARP4B, Length 8,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-211ENST00000612396 PELP1Q8IZL8 1130 aaKnown RBP27.41■■□□□ 1.98
LARP4B-211ENST00000612396 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
LARP4B-211ENST00000612396 MYT1Q01538 1121 aa26.25■■□□□ 1.79
LARP4B-211ENST00000612396 CCER1Q8TC90 406 aaPredicted RBP26.05■■□□□ 1.76
LARP4B-211ENST00000612396 ERICH6Q7L0X2 663 aa25.82■■□□□ 1.72
LARP4B-211ENST00000612396 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
LARP4B-211ENST00000612396 APLP2Q06481 763 aa25.7■■□□□ 1.71
LARP4B-211ENST00000612396 CENPBP07199 599 aaPredicted RBP25.68■■□□□ 1.7
LARP4B-211ENST00000612396 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
LARP4B-211ENST00000612396 ZEB1P37275 1124 aaPredicted RBP25.48■■□□□ 1.67
LARP4B-211ENST00000612396 NEFLP07196 543 aa25.12■■□□□ 1.61
LARP4B-211ENST00000612396 NISCHQ9Y2I1 1504 aa25.11■■□□□ 1.61
LARP4B-211ENST00000612396 YTHDC1Q96MU7 727 aaKnown RBP25.09■■□□□ 1.61
LARP4B-211ENST00000612396 SHROOM4Q9ULL8 1493 aa24.83■■□□□ 1.57
LARP4B-211ENST00000612396 PCGF6Q9BYE7 350 aa24.75■■□□□ 1.55
LARP4B-211ENST00000612396 EHMT2Q96KQ7 1210 aa24.74■■□□□ 1.55
LARP4B-211ENST00000612396 DAXXQ9UER7 740 aaPredicted RBP24.65■■□□□ 1.54
LARP4B-211ENST00000612396 TTBK1Q5TCY1 1321 aaPredicted RBP24.42■■□□□ 1.5
LARP4B-211ENST00000612396 TRIM41Q8WV44 630 aa24.17■■□□□ 1.46
LARP4B-211ENST00000612396 RTL5Q5HYW3 569 aaPredicted RBP24.14■■□□□ 1.45
LARP4B-211ENST00000612396 UBTFP17480 764 aaKnown RBP23.99■■□□□ 1.43
LARP4B-211ENST00000612396 ZNF316A6NFI3 1004 aaPredicted RBP23.96■■□□□ 1.43
LARP4B-211ENST00000612396 ATP1B4Q9UN42 357 aaPredicted RBP23.96■■□□□ 1.43
LARP4B-211ENST00000612396 TRIM26Q12899 539 aaPredicted RBP23.95■■□□□ 1.42
LARP4B-211ENST00000612396 RANGAP1P46060 587 aaPredicted RBP23.76■■□□□ 1.39
LARP4B-211ENST00000612396 HRCP23327 699 aa23.7■■□□□ 1.38
LARP4B-211ENST00000612396 CLSPNQ9HAW4 1339 aa23.6■■□□□ 1.37
LARP4B-211ENST00000612396 POLR3GLQ9BT43 218 aa23.35■■□□□ 1.33
LARP4B-211ENST00000612396 CDK11AQ9UQ88 783 aaPredicted RBP23.31■■□□□ 1.32
LARP4B-211ENST00000612396 GLIPR1L2Q4G1C9 344 aa23.31■■□□□ 1.32
LARP4B-211ENST00000612396 DIEXFQ68CQ4 756 aaKnown RBP23.3■■□□□ 1.32
LARP4B-211ENST00000612396 ZBTB47Q9UFB7 747 aaPredicted RBP23.29■■□□□ 1.32
LARP4B-211ENST00000612396 MYT1LQ9UL68 1186 aa23.29■■□□□ 1.32
LARP4B-211ENST00000612396 ANP32BQ92688 251 aaKnown RBP23.14■■□□□ 1.29
LARP4B-211ENST00000612396 ANP32AP39687 249 aaKnown RBP23.09■■□□□ 1.29
LARP4B-211ENST00000612396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.08■■□□□ 1.29
LARP4B-211ENST00000612396 HNRNPUL2Q1KMD3 747 aaKnown RBP23.08■■□□□ 1.29
LARP4B-211ENST00000612396 ITGAEP38570 1179 aa23.07■■□□□ 1.28
LARP4B-211ENST00000612396 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
LARP4B-211ENST00000612396 ANP32CO43423 234 aa23.03■■□□□ 1.28
LARP4B-211ENST00000612396 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
LARP4B-211ENST00000612396 NEFMP07197 916 aa22.91■■□□□ 1.26
LARP4B-211ENST00000612396 GTF3C3Q9Y5Q9 886 aa22.86■■□□□ 1.25
LARP4B-211ENST00000612396 CANXP27824 592 aaKnown RBP22.86■■□□□ 1.25
LARP4B-211ENST00000612396 CNGB1Q14028 1251 aaPredicted RBP22.76■■□□□ 1.23
LARP4B-211ENST00000612396 UPF2Q9HAU5 1272 aaKnown RBP22.75■■□□□ 1.23
LARP4B-211ENST00000612396 EIF5BO60841 1220 aaKnown RBP22.69■■□□□ 1.22
LARP4B-211ENST00000612396 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
LARP4B-211ENST00000612396 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
LARP4B-211ENST00000612396 TRIM52Q96A61 297 aa22.65■■□□□ 1.22
LARP4B-211ENST00000612396 HSP90AA1P07900 732 aaKnown RBP22.64■■□□□ 1.21
LARP4B-211ENST00000612396 BCANQ96GW7 911 aa22.63■■□□□ 1.21
LARP4B-211ENST00000612396 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
LARP4B-211ENST00000612396 LOC105371045A0A1W2PR82 267 aa22.51■■□□□ 1.19
LARP4B-211ENST00000612396 ANP32EQ9BTT0 268 aa22.5■■□□□ 1.19
LARP4B-211ENST00000612396 NEUROD1Q13562 356 aa22.48■■□□□ 1.19
LARP4B-211ENST00000612396 TNNT2P45379 298 aaPredicted RBP22.43■■□□□ 1.18
LARP4B-211ENST00000612396 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.36■■□□□ 1.17
LARP4B-211ENST00000612396 NPM2Q86SE8 214 aaKnown RBP22.34■■□□□ 1.17
LARP4B-211ENST00000612396 CDK11BP21127 795 aaKnown RBP22.32■■□□□ 1.16
LARP4B-211ENST00000612396 ZNF326Q5BKZ1 582 aaKnown RBP22.32■■□□□ 1.16
LARP4B-211ENST00000612396 SLC24A1O60721 1099 aa22.31■■□□□ 1.16
LARP4B-211ENST00000612396 DDRGK1Q96HY6 314 aa22.23■■□□□ 1.15
LARP4B-211ENST00000612396 BECN1Q14457 450 aa22.19■■□□□ 1.14
LARP4B-211ENST00000612396 TRIM44Q96DX7 344 aaPredicted RBP22.17■■□□□ 1.14
LARP4B-211ENST00000612396 FKBP8Q14318 412 aa22.17■■□□□ 1.14
LARP4B-211ENST00000612396 GOLGA6L22H0YM25 854 aa22.14■■□□□ 1.14
LARP4B-211ENST00000612396 TONSLQ96HA7 1378 aa22.13■■□□□ 1.13
LARP4B-211ENST00000612396 CCDC136Q96JN2 1154 aa22.13■■□□□ 1.13
LARP4B-211ENST00000612396 NCLP19338 710 aaKnown RBP22.11■■□□□ 1.13
LARP4B-211ENST00000612396 MYH16Q9H6N6 1097 aa22.09■■□□□ 1.13
LARP4B-211ENST00000612396 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
LARP4B-211ENST00000612396 ERICH6BQ5W0A0 696 aa22.05■■□□□ 1.12
LARP4B-211ENST00000612396 HNRNPUQ00839 825 aaKnown RBP eCLIP22.03■■□□□ 1.12
LARP4B-211ENST00000612396 NBR1Q14596 966 aa21.98■■□□□ 1.11
LARP4B-211ENST00000612396 DCAF1Q9Y4B6 1507 aa21.98■■□□□ 1.11
LARP4B-211ENST00000612396 ZRSR1Q15695 479 aaKnown RBP21.92■■□□□ 1.1
LARP4B-211ENST00000612396 TMC1Q8TDI8 760 aa21.92■■□□□ 1.1
LARP4B-211ENST00000612396 WDR43Q15061 677 aaKnown RBP eCLIP21.92■■□□□ 1.1
LARP4B-211ENST00000612396 PPM1GO15355 546 aaPredicted RBP21.9■■□□□ 1.1
LARP4B-211ENST00000612396 GOLGA6L6A8MZA4 724 aa21.87■■□□□ 1.09
LARP4B-211ENST00000612396 CASC1Q6TDU7 716 aa21.85■■□□□ 1.09
LARP4B-211ENST00000612396 ESF1Q9H501 851 aaKnown RBP21.83■■□□□ 1.09
LARP4B-211ENST00000612396 PTMAP06454 111 aaKnown RBP21.82■■□□□ 1.08
LARP4B-211ENST00000612396 NRDCO43847 1150 aa21.82■■□□□ 1.08
LARP4B-211ENST00000612396 FAM9BQ8IZU0 186 aa21.79■■□□□ 1.08
LARP4B-211ENST00000612396 DNTTIP2Q5QJE6 756 aaKnown RBP21.76■■□□□ 1.07
LARP4B-211ENST00000612396 ARXQ96QS3 562 aa21.73■■□□□ 1.07
LARP4B-211ENST00000612396 CHAF1AQ13111 956 aaPredicted RBP21.71■■□□□ 1.07
LARP4B-211ENST00000612396 CHMP4BQ9H444 224 aaKnown RBP21.71■■□□□ 1.07
LARP4B-211ENST00000612396 CSRNP3Q8WYN3 585 aa21.7■■□□□ 1.06
LARP4B-211ENST00000612396 MRS2Q9HD23 443 aa21.7■■□□□ 1.06
LARP4B-211ENST00000612396 L1TD1Q5T7N2 865 aaKnown RBP21.69■■□□□ 1.06
LARP4B-211ENST00000612396 STAG3Q9UJ98 1225 aa21.68■■□□□ 1.06
LARP4B-211ENST00000612396 DDX10Q13206 875 aaKnown RBP21.65■■□□□ 1.06
LARP4B-211ENST00000612396 NAP1L5Q96NT1 182 aaPredicted RBP21.63■■□□□ 1.05
LARP4B-211ENST00000612396 CFAP44Q96MT7 982 aa21.6■■□□□ 1.05
LARP4B-211ENST00000612396 ZNF777Q9ULD5 760 aaPredicted RBP21.59■■□□□ 1.05
LARP4B-211ENST00000612396 PTMSP20962 102 aa21.57■■□□□ 1.04
LARP4B-211ENST00000612396 FBLN2P98095 1184 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms