RNA–Protein interactions for RNA: ENST00000335753.8

SLK-201, Transcript of STE20 like kinase, humanhuman

TSL 1 (best) BASIC

Gene SLK, Length 7,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLK-201ENST00000335753 DCAF8L2P0C7V8 631 aa27.54■■■□□ 2
SLK-201ENST00000335753 PELP1Q8IZL8 1130 aaKnown RBP26.01■■□□□ 1.75
SLK-201ENST00000335753 EHMT2Q96KQ7 1210 aa26.01■■□□□ 1.75
SLK-201ENST00000335753 ERICH6Q7L0X2 663 aa25.45■■□□□ 1.66
SLK-201ENST00000335753 SUPT5HO00267 1087 aaKnown RBP25.39■■□□□ 1.65
SLK-201ENST00000335753 MYT1Q01538 1121 aa25.2■■□□□ 1.63
SLK-201ENST00000335753 APLP2Q06481 763 aa25.11■■□□□ 1.61
SLK-201ENST00000335753 TTBK1Q5TCY1 1321 aaPredicted RBP25.07■■□□□ 1.6
SLK-201ENST00000335753 FAM9AQ8IZU1 332 aaPredicted RBP25.02■■□□□ 1.6
SLK-201ENST00000335753 CCER1Q8TC90 406 aaPredicted RBP24.91■■□□□ 1.58
SLK-201ENST00000335753 RANGAP1P46060 587 aaPredicted RBP24.7■■□□□ 1.54
SLK-201ENST00000335753 ATP1B4Q9UN42 357 aaPredicted RBP24.69■■□□□ 1.54
SLK-201ENST00000335753 SHROOM4Q9ULL8 1493 aa24.58■■□□□ 1.53
SLK-201ENST00000335753 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.5
SLK-201ENST00000335753 NEFLP07196 543 aa24.24■■□□□ 1.47
SLK-201ENST00000335753 DAXXQ9UER7 740 aaPredicted RBP24.23■■□□□ 1.47
SLK-201ENST00000335753 CENPBP07199 599 aaPredicted RBP24.17■■□□□ 1.46
SLK-201ENST00000335753 MYT1LQ9UL68 1186 aa24.17■■□□□ 1.46
SLK-201ENST00000335753 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
SLK-201ENST00000335753 YTHDC1Q96MU7 727 aaKnown RBP24.12■■□□□ 1.45
SLK-201ENST00000335753 POLR3GLQ9BT43 218 aa24.01■■□□□ 1.43
SLK-201ENST00000335753 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
SLK-201ENST00000335753 SLC4A1APQ9BWU0 796 aaKnown RBP23.91■■□□□ 1.42
SLK-201ENST00000335753 CLSPNQ9HAW4 1339 aa23.56■■□□□ 1.36
SLK-201ENST00000335753 UBTFP17480 764 aaKnown RBP23.56■■□□□ 1.36
SLK-201ENST00000335753 ZNF316A6NFI3 1004 aaPredicted RBP23.53■■□□□ 1.36
SLK-201ENST00000335753 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
SLK-201ENST00000335753 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
SLK-201ENST00000335753 BCL11AQ9H165 835 aa23.45■■□□□ 1.35
SLK-201ENST00000335753 SLC24A1O60721 1099 aa23.43■■□□□ 1.34
SLK-201ENST00000335753 PPARGC1BQ86YN6 1023 aaKnown RBP23.39■■□□□ 1.34
SLK-201ENST00000335753 ITGAEP38570 1179 aa23.37■■□□□ 1.33
SLK-201ENST00000335753 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
SLK-201ENST00000335753 RTL5Q5HYW3 569 aaPredicted RBP23.22■■□□□ 1.31
SLK-201ENST00000335753 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
SLK-201ENST00000335753 ZBTB47Q9UFB7 747 aaPredicted RBP23.05■■□□□ 1.28
SLK-201ENST00000335753 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
SLK-201ENST00000335753 BCANQ96GW7 911 aa22.86■■□□□ 1.25
SLK-201ENST00000335753 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.21
SLK-201ENST00000335753 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
SLK-201ENST00000335753 EIF5BO60841 1220 aaKnown RBP22.54■■□□□ 1.2
SLK-201ENST00000335753 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
SLK-201ENST00000335753 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
SLK-201ENST00000335753 NEFMP07197 916 aa22.46■■□□□ 1.19
SLK-201ENST00000335753 A0A0G2JS52 829 aa22.4■■□□□ 1.18
SLK-201ENST00000335753 FAM50AQ14320 339 aaKnown RBP22.39■■□□□ 1.17
SLK-201ENST00000335753 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
SLK-201ENST00000335753 CDK11BP21127 795 aaKnown RBP22.35■■□□□ 1.17
SLK-201ENST00000335753 CDK11AQ9UQ88 783 aaPredicted RBP22.35■■□□□ 1.17
SLK-201ENST00000335753 HSP90AA1P07900 732 aaKnown RBP22.33■■□□□ 1.16
SLK-201ENST00000335753 TULP1O00294 542 aaPredicted RBP22.32■■□□□ 1.16
SLK-201ENST00000335753 ANP32BQ92688 251 aaKnown RBP22.31■■□□□ 1.16
SLK-201ENST00000335753 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
SLK-201ENST00000335753 ARXQ96QS3 562 aa22.24■■□□□ 1.15
SLK-201ENST00000335753 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
SLK-201ENST00000335753 NCBP3Q53F19 620 aaKnown RBP22.24■■□□□ 1.15
SLK-201ENST00000335753 HRCP23327 699 aa22.22■■□□□ 1.15
SLK-201ENST00000335753 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
SLK-201ENST00000335753 FBLN2P98095 1184 aa22.13■■□□□ 1.13
SLK-201ENST00000335753 PLEKHG5O94827 1062 aa22.11■■□□□ 1.13
SLK-201ENST00000335753 ESF1Q9H501 851 aaKnown RBP22.07■■□□□ 1.12
SLK-201ENST00000335753 DIEXFQ68CQ4 756 aaKnown RBP22.05■■□□□ 1.12
SLK-201ENST00000335753 ANP32CO43423 234 aa22.02■■□□□ 1.12
SLK-201ENST00000335753 ANP32AP39687 249 aaKnown RBP22.02■■□□□ 1.12
SLK-201ENST00000335753 STAG3Q9UJ98 1225 aa21.99■■□□□ 1.11
SLK-201ENST00000335753 CHGAP10645 457 aaKnown RBP21.9■■□□□ 1.1
SLK-201ENST00000335753 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
SLK-201ENST00000335753 ZBTB7CA1YPR0 619 aa21.86■■□□□ 1.09
SLK-201ENST00000335753 GLIPR1L2Q4G1C9 344 aa21.86■■□□□ 1.09
SLK-201ENST00000335753 LOC105371045A0A1W2PR82 267 aa21.84■■□□□ 1.09
SLK-201ENST00000335753 UPF2Q9HAU5 1272 aaKnown RBP21.84■■□□□ 1.09
SLK-201ENST00000335753 SALL2Q9Y467 1007 aaPredicted RBP21.81■■□□□ 1.08
SLK-201ENST00000335753 TPRNQ4KMQ1 711 aa21.78■■□□□ 1.08
SLK-201ENST00000335753 SENP3Q9H4L4 574 aaPredicted RBP21.75■■□□□ 1.07
SLK-201ENST00000335753 TAOK2Q9UL54 1235 aa21.74■■□□□ 1.07
SLK-201ENST00000335753 GTF3C3Q9Y5Q9 886 aa21.71■■□□□ 1.07
SLK-201ENST00000335753 AMER1Q5JTC6 1135 aaPredicted RBP21.7■■□□□ 1.06
SLK-201ENST00000335753 NBR1Q14596 966 aa21.69■■□□□ 1.06
SLK-201ENST00000335753 ZNF777Q9ULD5 760 aaPredicted RBP21.69■■□□□ 1.06
SLK-201ENST00000335753 C14orf37Q86TY3 774 aa21.66■■□□□ 1.06
SLK-201ENST00000335753 NPHP1O15259 732 aa21.57■■□□□ 1.04
SLK-201ENST00000335753 CLSTN1O94985 981 aa21.56■■□□□ 1.04
SLK-201ENST00000335753 HAP1P54257 671 aaPredicted RBP21.55■■□□□ 1.04
SLK-201ENST00000335753 PRM3Q9NNZ6 103 aa21.49■■□□□ 1.03
SLK-201ENST00000335753 P3H3Q8IVL6 736 aa21.48■■□□□ 1.03
SLK-201ENST00000335753 ZRSR1Q15695 479 aaKnown RBP21.48■■□□□ 1.03
SLK-201ENST00000335753 MYH16Q9H6N6 1097 aa21.44■■□□□ 1.02
SLK-201ENST00000335753 NCLP19338 710 aaKnown RBP21.42■■□□□ 1.02
SLK-201ENST00000335753 FAM9BQ8IZU0 186 aa21.42■■□□□ 1.02
SLK-201ENST00000335753 DNTTIP2Q5QJE6 756 aaKnown RBP21.41■■□□□ 1.02
SLK-201ENST00000335753 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.41■■□□□ 1.02
SLK-201ENST00000335753 TRIM44Q96DX7 344 aaPredicted RBP21.38■■□□□ 1.01
SLK-201ENST00000335753 TNNT2P45379 298 aaPredicted RBP21.36■■□□□ 1.01
SLK-201ENST00000335753 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.36■■□□□ 1.016e-7■■■■□ 21.4
SLK-201ENST00000335753 FKBP8Q14318 412 aa21.35■■□□□ 1.01
SLK-201ENST00000335753 PTMAP06454 111 aaKnown RBP21.34■■□□□ 1.01
SLK-201ENST00000335753 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
SLK-201ENST00000335753 NPM1P06748 294 aaKnown RBP eCLIP21.27■■□□□ 1
SLK-201ENST00000335753 PLCB2Q00722 1185 aa21.27■■□□□ 1
SLK-201ENST00000335753 HNRNPUQ00839 825 aaKnown RBP eCLIP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms