Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.23■□□□□ 0.51
SNAP47Q5SQN1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 Z82202.1-201ENST00000623446 1880 ntBASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 AC008622.2-201ENST00000617006 1229 ntBASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.22■□□□□ 0.51
SNAP47Q5SQN1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 AL158211.5-201ENST00000623583 2518 ntBASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 AC098818.2-201ENST00000564925 2320 ntBASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 AP000523.1-201ENST00000398242 1049 ntBASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 KRT18P38-201ENST00000449496 1282 ntBASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 AL671277.2-201ENST00000458060 996 ntBASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNAP47Q5SQN1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 GCSHP2-201ENST00000560971 527 ntBASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.2■□□□□ 0.5
SNAP47Q5SQN1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms