RNA–Protein interactions for RNA: ENST00000599628.5

TRPM4-213, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2 BASIC

Gene TRPM4, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-213ENST00000599628 NISCHQ9Y2I1 1504 aa44.99■■■■■ 4.79
TRPM4-213ENST00000599628 CCDC180Q9P1Z9 1646 aa39.81■■■■□ 3.96
TRPM4-213ENST00000599628 ABCC9O60706 1549 aa38.98■■■■□ 3.83
TRPM4-213ENST00000599628 DCAF8L2P0C7V8 631 aa37.73■■■■□ 3.63
TRPM4-213ENST00000599628 ZCCHC6Q5VYS8 1495 aaKnown RBP37.49■■■■□ 3.59
TRPM4-213ENST00000599628 RB1CC1Q8TDY2 1594 aa37.43■■■■□ 3.58
TRPM4-213ENST00000599628 NACADO15069 1562 aa37.41■■■■□ 3.58
TRPM4-213ENST00000599628 MYO15BQ96JP2 1530 aa37.18■■■■□ 3.54
TRPM4-213ENST00000599628 DCAF1Q9Y4B6 1507 aa37.13■■■■□ 3.53
TRPM4-213ENST00000599628 UNC13AQ9UPW8 1703 aa36.66■■■■□ 3.46
TRPM4-213ENST00000599628 PABPN1Q86U42 306 aaKnown RBP eCLIP36.52■■■■□ 3.44
TRPM4-213ENST00000599628 SCRIBQ14160 1630 aa36.5■■■■□ 3.43
TRPM4-213ENST00000599628 BICRAQ9NZM4 1560 aa36.36■■■■□ 3.41
TRPM4-213ENST00000599628 SHROOM4Q9ULL8 1493 aa35.85■■■■□ 3.33
TRPM4-213ENST00000599628 DNAJC5BQ9UF47 199 aa35.69■■■■□ 3.3
TRPM4-213ENST00000599628 EIF4G1Q04637 1599 aaKnown RBP35.36■■■■□ 3.25
TRPM4-213ENST00000599628 CC2D2AQ9P2K1 1620 aa35.2■■■■□ 3.23
TRPM4-213ENST00000599628 CECR2Q9BXF3 1484 aa35.13■■■■□ 3.21
TRPM4-213ENST00000599628 SMARCA4P51532 1647 aa34.86■■■■□ 3.17
TRPM4-213ENST00000599628 BAZ1AQ9NRL2 1556 aaPredicted RBP34.82■■■■□ 3.16
TRPM4-213ENST00000599628 MROH2BQ7Z745 1585 aa34.74■■■■□ 3.15
TRPM4-213ENST00000599628 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
TRPM4-213ENST00000599628 NCAPD3P42695 1498 aa34.56■■■■□ 3.12
TRPM4-213ENST00000599628 SMARCA2P51531 1590 aa34.55■■■■□ 3.12
TRPM4-213ENST00000599628 PEG3Q9GZU2 1588 aa34.45■■■■□ 3.11
TRPM4-213ENST00000599628 RSF1Q96T23 1441 aaPredicted RBP34.39■■■■□ 3.1
TRPM4-213ENST00000599628 WIZO95785 1651 aa34.39■■■■□ 3.1
TRPM4-213ENST00000599628 BAZ1BQ9UIG0 1483 aaKnown RBP34.37■■■■□ 3.09
TRPM4-213ENST00000599628 HMGXB3Q12766 1538 aa34.36■■■■□ 3.09
TRPM4-213ENST00000599628 TOP2AP11388 1531 aaKnown RBP33.94■■■■□ 3.02
TRPM4-213ENST00000599628 SUPT5HO00267 1087 aaKnown RBP33.82■■■■□ 3
TRPM4-213ENST00000599628 NESP48681 1621 aa33.8■■■■□ 3
TRPM4-213ENST00000599628 CCDC88BA6NC98 1476 aa33.62■■■□□ 2.97
TRPM4-213ENST00000599628 CADPSQ9ULU8 1353 aa33.6■■■□□ 2.97
TRPM4-213ENST00000599628 LAMC3Q9Y6N6 1575 aa33.59■■■□□ 2.97
TRPM4-213ENST00000599628 ERCC6Q03468 1493 aa33.52■■■□□ 2.96
TRPM4-213ENST00000599628 CFTRP13569 1480 aa33.41■■■□□ 2.94
TRPM4-213ENST00000599628 PDS5BQ9NTI5 1447 aa33.39■■■□□ 2.94
TRPM4-213ENST00000599628 KIF21AQ7Z4S6 1674 aa33.34■■■□□ 2.93
TRPM4-213ENST00000599628 FANCD2Q9BXW9 1451 aa33.23■■■□□ 2.91
TRPM4-213ENST00000599628 THOC2Q8NI27 1593 aaKnown RBP33.14■■■□□ 2.9
TRPM4-213ENST00000599628 CEP164Q9UPV0 1460 aa33.14■■■□□ 2.9
TRPM4-213ENST00000599628 PRDM2Q13029 1718 aa33.12■■■□□ 2.89
TRPM4-213ENST00000599628 MRC2Q9UBG0 1479 aa33.04■■■□□ 2.88
TRPM4-213ENST00000599628 CUX2O14529 1486 aa33■■■□□ 2.87
TRPM4-213ENST00000599628 WDR62O43379 1518 aa32.91■■■□□ 2.86
TRPM4-213ENST00000599628 URB2Q14146 1524 aaKnown RBP32.9■■■□□ 2.86
TRPM4-213ENST00000599628 TOPBP1Q92547 1522 aa32.72■■■□□ 2.83
TRPM4-213ENST00000599628 DNMBPQ6XZF7 1577 aa32.64■■■□□ 2.82
TRPM4-213ENST00000599628 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
TRPM4-213ENST00000599628 CUX1P39880 1505 aa32.56■■■□□ 2.8
TRPM4-213ENST00000599628 POLA1P09884 1462 aaPredicted RBP32.45■■■□□ 2.79
TRPM4-213ENST00000599628 FGD5Q6ZNL6 1462 aa32.42■■■□□ 2.78
TRPM4-213ENST00000599628 IFT140Q96RY7 1462 aa32.41■■■□□ 2.78
TRPM4-213ENST00000599628 WRNQ14191 1432 aaPredicted RBP eCLIP32.4■■■□□ 2.78
TRPM4-213ENST00000599628 RAD54L2Q9Y4B4 1467 aa32.38■■■□□ 2.77
TRPM4-213ENST00000599628 ZNF608Q9ULD9 1512 aaPredicted RBP32.36■■■□□ 2.77
TRPM4-213ENST00000599628 SYNJ1O43426 1573 aa32.34■■■□□ 2.77
TRPM4-213ENST00000599628 SOGA1O94964 1423 aa32.34■■■□□ 2.77
TRPM4-213ENST00000599628 TARBP1Q13395 1621 aaKnown RBP32.33■■■□□ 2.77
TRPM4-213ENST00000599628 TOP2BQ02880 1626 aa32.28■■■□□ 2.76
TRPM4-213ENST00000599628 BIVM-ERCC5R4GMW8 1640 aa32.26■■■□□ 2.75
TRPM4-213ENST00000599628 AQRO60306 1485 aaKnown RBP eCLIP32.21■■■□□ 2.757e-8■■■□□ 16.7
TRPM4-213ENST00000599628 TDRD9Q8NDG6 1382 aaKnown RBP32.2■■■□□ 2.74
TRPM4-213ENST00000599628 EIF4G3O43432 1585 aaKnown RBP32.17■■■□□ 2.74
TRPM4-213ENST00000599628 WDR97A6NE52 1622 aa32.07■■■□□ 2.72
TRPM4-213ENST00000599628 ABCA10Q8WWZ4 1543 aa32.06■■■□□ 2.72
TRPM4-213ENST00000599628 GAPVD1Q14C86 1478 aa31.95■■■□□ 2.71
TRPM4-213ENST00000599628 ABCA5Q8WWZ7 1642 aa31.91■■■□□ 2.7
TRPM4-213ENST00000599628 GRIN2BQ13224 1484 aa31.89■■■□□ 2.7
TRPM4-213ENST00000599628 DNAJC5Q9H3Z4 198 aa31.89■■■□□ 2.69
TRPM4-213ENST00000599628 SNAPC4Q5SXM2 1469 aa31.86■■■□□ 2.69
TRPM4-213ENST00000599628 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
TRPM4-213ENST00000599628 PBRM1Q86U86 1689 aa31.85■■■□□ 2.69
TRPM4-213ENST00000599628 FBLN2P98095 1184 aa31.84■■■□□ 2.69
TRPM4-213ENST00000599628 OSCARQ8IYS5 282 aa31.78■■■□□ 2.68
TRPM4-213ENST00000599628 MAGI1Q96QZ7 1491 aaPredicted RBP31.75■■■□□ 2.67
TRPM4-213ENST00000599628 CHD1O14646 1710 aa31.75■■■□□ 2.67
TRPM4-213ENST00000599628 CHMP7Q8WUX9 453 aaPredicted RBP31.72■■■□□ 2.67
TRPM4-213ENST00000599628 KIF27Q86VH2 1401 aa31.69■■■□□ 2.66
TRPM4-213ENST00000599628 SYNJ2O15056 1496 aa31.66■■■□□ 2.66
TRPM4-213ENST00000599628 ERICH3Q5RHP9 1530 aa31.65■■■□□ 2.66
TRPM4-213ENST00000599628 CHIC1Q5VXU3 224 aa31.61■■■□□ 2.65
TRPM4-213ENST00000599628 RUSC2Q8N2Y8 1516 aa31.6■■■□□ 2.65
TRPM4-213ENST00000599628 ADAMTS12P58397 1594 aa31.6■■■□□ 2.65
TRPM4-213ENST00000599628 IGF1RP08069 1367 aa31.59■■■□□ 2.65
TRPM4-213ENST00000599628 FHAD1B1AJZ9 1412 aa31.56■■■□□ 2.64
TRPM4-213ENST00000599628 GRIN2AQ12879 1464 aa31.5■■■□□ 2.63
TRPM4-213ENST00000599628 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
TRPM4-213ENST00000599628 CUL7Q14999 1698 aa31.39■■■□□ 2.62
TRPM4-213ENST00000599628 CLASP1Q7Z460 1538 aa31.36■■■□□ 2.61
TRPM4-213ENST00000599628 CEP170Q5SW79 1584 aa31.36■■■□□ 2.61
TRPM4-213ENST00000599628 NUP160Q12769 1436 aa31.32■■■□□ 2.6
TRPM4-213ENST00000599628 FAM9AQ8IZU1 332 aaPredicted RBP31.31■■■□□ 2.6
TRPM4-213ENST00000599628 ARHGEF11O15085 1522 aa31.24■■■□□ 2.59
TRPM4-213ENST00000599628 RIMBP3CA6NJZ7 1639 aa31.23■■■□□ 2.59
TRPM4-213ENST00000599628 RIMBP3BA6NNM3 1639 aa31.23■■■□□ 2.59
TRPM4-213ENST00000599628 RIMBP3Q9UFD9 1639 aa31.23■■■□□ 2.59
TRPM4-213ENST00000599628 CSRNP3Q8WYN3 585 aa31.21■■■□□ 2.59
TRPM4-213ENST00000599628 RAPGEF2Q9Y4G8 1499 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms