RNA–Protein interactions for RNA: ENST00000640103.1

AVL9-209, Transcript of AVL9 cell migration associated, humanhuman

TSL 5 BASIC

Gene AVL9, Length 1,367 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AVL9-209ENST00000640103 NISCHQ9Y2I1 1504 aa45.38■■■■■ 4.86
AVL9-209ENST00000640103 CCDC180Q9P1Z9 1646 aa40.23■■■■■ 4.03
AVL9-209ENST00000640103 ABCC9O60706 1549 aa39.38■■■■□ 3.9
AVL9-209ENST00000640103 ZCCHC6Q5VYS8 1495 aaKnown RBP37.91■■■■□ 3.66
AVL9-209ENST00000640103 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.63
AVL9-209ENST00000640103 NACADO15069 1562 aa37.71■■■■□ 3.63
AVL9-209ENST00000640103 MYO15BQ96JP2 1530 aa37.69■■■■□ 3.62
AVL9-209ENST00000640103 DCAF1Q9Y4B6 1507 aa37.65■■■■□ 3.62
AVL9-209ENST00000640103 DCAF8L2P0C7V8 631 aa37.52■■■■□ 3.6
AVL9-209ENST00000640103 UNC13AQ9UPW8 1703 aa36.93■■■■□ 3.5
AVL9-209ENST00000640103 PABPN1Q86U42 306 aaKnown RBP eCLIP36.73■■■■□ 3.47
AVL9-209ENST00000640103 BICRAQ9NZM4 1560 aa36.65■■■■□ 3.46
AVL9-209ENST00000640103 SCRIBQ14160 1630 aa36.61■■■■□ 3.45
AVL9-209ENST00000640103 DNAJC5BQ9UF47 199 aa36.43■■■■□ 3.42
AVL9-209ENST00000640103 SHROOM4Q9ULL8 1493 aa36.22■■■■□ 3.39
AVL9-209ENST00000640103 EIF4G1Q04637 1599 aaKnown RBP35.7■■■■□ 3.31
AVL9-209ENST00000640103 CC2D2AQ9P2K1 1620 aa35.63■■■■□ 3.29
AVL9-209ENST00000640103 CECR2Q9BXF3 1484 aa35.43■■■■□ 3.26
AVL9-209ENST00000640103 BAZ1AQ9NRL2 1556 aaPredicted RBP35.15■■■■□ 3.22
AVL9-209ENST00000640103 SMARCA4P51532 1647 aa35.13■■■■□ 3.21
AVL9-209ENST00000640103 MROH2BQ7Z745 1585 aa34.94■■■■□ 3.18
AVL9-209ENST00000640103 PEG3Q9GZU2 1588 aa34.86■■■■□ 3.17
AVL9-209ENST00000640103 ATAD2BQ9ULI0 1458 aa34.83■■■■□ 3.17
AVL9-209ENST00000640103 SMARCA2P51531 1590 aa34.82■■■■□ 3.17
AVL9-209ENST00000640103 NCAPD3P42695 1498 aa34.78■■■■□ 3.16
AVL9-209ENST00000640103 RSF1Q96T23 1441 aaPredicted RBP34.7■■■■□ 3.14
AVL9-209ENST00000640103 HMGXB3Q12766 1538 aa34.66■■■■□ 3.14
AVL9-209ENST00000640103 WIZO95785 1651 aa34.59■■■■□ 3.13
AVL9-209ENST00000640103 BAZ1BQ9UIG0 1483 aaKnown RBP34.53■■■■□ 3.12
AVL9-209ENST00000640103 TOP2AP11388 1531 aaKnown RBP34.28■■■■□ 3.08
AVL9-209ENST00000640103 NESP48681 1621 aa34.01■■■■□ 3.03
AVL9-209ENST00000640103 ERCC6Q03468 1493 aa33.96■■■■□ 3.03
AVL9-209ENST00000640103 SUPT5HO00267 1087 aaKnown RBP33.95■■■■□ 3.02
AVL9-209ENST00000640103 LAMC3Q9Y6N6 1575 aa33.88■■■■□ 3.01
AVL9-209ENST00000640103 CCDC88BA6NC98 1476 aa33.83■■■■□ 3.01
AVL9-209ENST00000640103 CADPSQ9ULU8 1353 aa33.74■■■□□ 2.99
AVL9-209ENST00000640103 CUX2O14529 1486 aa33.73■■■□□ 2.99
AVL9-209ENST00000640103 CFTRP13569 1480 aa33.66■■■□□ 2.98
AVL9-209ENST00000640103 PDS5BQ9NTI5 1447 aa33.63■■■□□ 2.97
AVL9-209ENST00000640103 KIF21AQ7Z4S6 1674 aa33.61■■■□□ 2.97
AVL9-209ENST00000640103 THOC2Q8NI27 1593 aaKnown RBP33.58■■■□□ 2.97
AVL9-209ENST00000640103 PRDM2Q13029 1718 aa33.49■■■□□ 2.95
AVL9-209ENST00000640103 FANCD2Q9BXW9 1451 aa33.34■■■□□ 2.93
AVL9-209ENST00000640103 MRC2Q9UBG0 1479 aa33.32■■■□□ 2.92
AVL9-209ENST00000640103 CEP164Q9UPV0 1460 aa33.3■■■□□ 2.92
AVL9-209ENST00000640103 WDR62O43379 1518 aa33.24■■■□□ 2.91
AVL9-209ENST00000640103 DNAJC5Q9H3Z4 198 aa33.05■■■□□ 2.88
AVL9-209ENST00000640103 URB2Q14146 1524 aaKnown RBP33.02■■■□□ 2.88
AVL9-209ENST00000640103 ABCC8Q09428 1581 aa32.94■■■□□ 2.86
AVL9-209ENST00000640103 DNMBPQ6XZF7 1577 aa32.89■■■□□ 2.86
AVL9-209ENST00000640103 TOPBP1Q92547 1522 aa32.87■■■□□ 2.85
AVL9-209ENST00000640103 CUX1P39880 1505 aa32.76■■■□□ 2.84
AVL9-209ENST00000640103 WRNQ14191 1432 aaPredicted RBP eCLIP32.69■■■□□ 2.82
AVL9-209ENST00000640103 BIVM-ERCC5R4GMW8 1640 aa32.64■■■□□ 2.82
AVL9-209ENST00000640103 TOP2BQ02880 1626 aa32.62■■■□□ 2.81
AVL9-209ENST00000640103 POLA1P09884 1462 aaPredicted RBP32.61■■■□□ 2.81
AVL9-209ENST00000640103 IFT140Q96RY7 1462 aa32.61■■■□□ 2.81
AVL9-209ENST00000640103 SYNJ1O43426 1573 aa32.6■■■□□ 2.81
AVL9-209ENST00000640103 FGD5Q6ZNL6 1462 aa32.57■■■□□ 2.81
AVL9-209ENST00000640103 TARBP1Q13395 1621 aaKnown RBP32.51■■■□□ 2.8
AVL9-209ENST00000640103 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.79
AVL9-209ENST00000640103 SOGA1O94964 1423 aa32.45■■■□□ 2.78
AVL9-209ENST00000640103 RAD54L2Q9Y4B4 1467 aa32.42■■■□□ 2.78
AVL9-209ENST00000640103 EIF4G3O43432 1585 aaKnown RBP32.38■■■□□ 2.77
AVL9-209ENST00000640103 WDR97A6NE52 1622 aa32.37■■■□□ 2.77
AVL9-209ENST00000640103 ABCA10Q8WWZ4 1543 aa32.33■■■□□ 2.77
AVL9-209ENST00000640103 AQRO60306 1485 aaKnown RBP eCLIP32.27■■■□□ 2.764e-6■■■■■ 31
AVL9-209ENST00000640103 OSCARQ8IYS5 282 aa32.24■■■□□ 2.75
AVL9-209ENST00000640103 TDRD9Q8NDG6 1382 aaKnown RBP32.18■■■□□ 2.74
AVL9-209ENST00000640103 ABCA5Q8WWZ7 1642 aa32.18■■■□□ 2.74
AVL9-209ENST00000640103 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
AVL9-209ENST00000640103 GAPVD1Q14C86 1478 aa32.1■■■□□ 2.73
AVL9-209ENST00000640103 GRIN2BQ13224 1484 aa32.05■■■□□ 2.72
AVL9-209ENST00000640103 PBRM1Q86U86 1689 aa32.05■■■□□ 2.72
AVL9-209ENST00000640103 CHD1O14646 1710 aa32.03■■■□□ 2.72
AVL9-209ENST00000640103 CHIC1Q5VXU3 224 aa32■■■□□ 2.71
AVL9-209ENST00000640103 KIF27Q86VH2 1401 aa31.98■■■□□ 2.71
AVL9-209ENST00000640103 SNAPC4Q5SXM2 1469 aa31.97■■■□□ 2.71
AVL9-209ENST00000640103 MAGI1Q96QZ7 1491 aaPredicted RBP31.97■■■□□ 2.71
AVL9-209ENST00000640103 ERICH3Q5RHP9 1530 aa31.96■■■□□ 2.71
AVL9-209ENST00000640103 FBLN2P98095 1184 aa31.92■■■□□ 2.7
AVL9-209ENST00000640103 ADAMTS12P58397 1594 aa31.82■■■□□ 2.68
AVL9-209ENST00000640103 RIMBP3CA6NJZ7 1639 aa31.82■■■□□ 2.68
AVL9-209ENST00000640103 RIMBP3BA6NNM3 1639 aa31.82■■■□□ 2.68
AVL9-209ENST00000640103 RIMBP3Q9UFD9 1639 aa31.82■■■□□ 2.68
AVL9-209ENST00000640103 SYNJ2O15056 1496 aa31.81■■■□□ 2.68
AVL9-209ENST00000640103 IGF1RP08069 1367 aa31.8■■■□□ 2.68
AVL9-209ENST00000640103 CHMP7Q8WUX9 453 aaPredicted RBP31.79■■■□□ 2.68
AVL9-209ENST00000640103 ARHGEF11O15085 1522 aa31.77■■■□□ 2.68
AVL9-209ENST00000640103 RUSC2Q8N2Y8 1516 aa31.77■■■□□ 2.68
AVL9-209ENST00000640103 FHAD1B1AJZ9 1412 aa31.77■■■□□ 2.68
AVL9-209ENST00000640103 CUL7Q14999 1698 aa31.75■■■□□ 2.67
AVL9-209ENST00000640103 CLASP1Q7Z460 1538 aa31.68■■■□□ 2.66
AVL9-209ENST00000640103 EEA1Q15075 1411 aa31.67■■■□□ 2.66
AVL9-209ENST00000640103 GRIN2AQ12879 1464 aa31.65■■■□□ 2.66
AVL9-209ENST00000640103 CARMIL1Q5VZK9 1371 aa31.6■■■□□ 2.65
AVL9-209ENST00000640103 NUP160Q12769 1436 aa31.53■■■□□ 2.64
AVL9-209ENST00000640103 PRXQ9BXM0 1461 aa31.51■■■□□ 2.63
AVL9-209ENST00000640103 ARAP1Q96P48 1450 aa31.49■■■□□ 2.63
AVL9-209ENST00000640103 CSRNP3Q8WYN3 585 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms