RNA–Protein interactions for RNA: ENST00000546360.5

WIPI1-202, Transcript of WD repeat domain, phosphoinositide interacting 1, humanhuman

TSL 2 BASIC

Gene WIPI1, Length 1,575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WIPI1-202ENST00000546360 NISCHQ9Y2I1 1504 aa45.37■■■■■ 4.85
WIPI1-202ENST00000546360 CCDC180Q9P1Z9 1646 aa40.32■■■■■ 4.05
WIPI1-202ENST00000546360 ABCC9O60706 1549 aa39.39■■■■□ 3.9
WIPI1-202ENST00000546360 RB1CC1Q8TDY2 1594 aa37.86■■■■□ 3.65
WIPI1-202ENST00000546360 ZCCHC6Q5VYS8 1495 aaKnown RBP37.85■■■■□ 3.65
WIPI1-202ENST00000546360 NACADO15069 1562 aa37.82■■■■□ 3.64
WIPI1-202ENST00000546360 DCAF8L2P0C7V8 631 aa37.81■■■■□ 3.64
WIPI1-202ENST00000546360 MYO15BQ96JP2 1530 aa37.57■■■■□ 3.6
WIPI1-202ENST00000546360 DCAF1Q9Y4B6 1507 aa37.49■■■■□ 3.59
WIPI1-202ENST00000546360 UNC13AQ9UPW8 1703 aa37.19■■■■□ 3.54
WIPI1-202ENST00000546360 SCRIBQ14160 1630 aa36.9■■■■□ 3.5
WIPI1-202ENST00000546360 BICRAQ9NZM4 1560 aa36.81■■■■□ 3.48
WIPI1-202ENST00000546360 PABPN1Q86U42 306 aaKnown RBP eCLIP36.78■■■■□ 3.48
WIPI1-202ENST00000546360 SHROOM4Q9ULL8 1493 aa36.26■■■■□ 3.4
WIPI1-202ENST00000546360 DNAJC5BQ9UF47 199 aa36.03■■■■□ 3.36
WIPI1-202ENST00000546360 EIF4G1Q04637 1599 aaKnown RBP35.79■■■■□ 3.32
WIPI1-202ENST00000546360 CC2D2AQ9P2K1 1620 aa35.64■■■■□ 3.3
WIPI1-202ENST00000546360 CECR2Q9BXF3 1484 aa35.4■■■■□ 3.26
WIPI1-202ENST00000546360 SMARCA4P51532 1647 aa35.25■■■■□ 3.23
WIPI1-202ENST00000546360 BAZ1AQ9NRL2 1556 aaPredicted RBP35.15■■■■□ 3.22
WIPI1-202ENST00000546360 MROH2BQ7Z745 1585 aa35.03■■■■□ 3.2
WIPI1-202ENST00000546360 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
WIPI1-202ENST00000546360 SMARCA2P51531 1590 aa34.9■■■■□ 3.18
WIPI1-202ENST00000546360 NCAPD3P42695 1498 aa34.87■■■■□ 3.17
WIPI1-202ENST00000546360 PEG3Q9GZU2 1588 aa34.84■■■■□ 3.17
WIPI1-202ENST00000546360 HMGXB3Q12766 1538 aa34.77■■■■□ 3.16
WIPI1-202ENST00000546360 WIZO95785 1651 aa34.7■■■■□ 3.15
WIPI1-202ENST00000546360 BAZ1BQ9UIG0 1483 aaKnown RBP34.69■■■■□ 3.14
WIPI1-202ENST00000546360 RSF1Q96T23 1441 aaPredicted RBP34.61■■■■□ 3.13
WIPI1-202ENST00000546360 TOP2AP11388 1531 aaKnown RBP34.27■■■■□ 3.08
WIPI1-202ENST00000546360 NESP48681 1621 aa34.15■■■■□ 3.06
WIPI1-202ENST00000546360 LAMC3Q9Y6N6 1575 aa33.98■■■■□ 3.03
WIPI1-202ENST00000546360 ERCC6Q03468 1493 aa33.88■■■■□ 3.01
WIPI1-202ENST00000546360 CADPSQ9ULU8 1353 aa33.85■■■■□ 3.01
WIPI1-202ENST00000546360 CCDC88BA6NC98 1476 aa33.85■■■■□ 3.01
WIPI1-202ENST00000546360 SUPT5HO00267 1087 aaKnown RBP33.81■■■■□ 3
WIPI1-202ENST00000546360 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
WIPI1-202ENST00000546360 CFTRP13569 1480 aa33.71■■■□□ 2.99
WIPI1-202ENST00000546360 PDS5BQ9NTI5 1447 aa33.68■■■□□ 2.98
WIPI1-202ENST00000546360 THOC2Q8NI27 1593 aaKnown RBP33.62■■■□□ 2.97
WIPI1-202ENST00000546360 PRDM2Q13029 1718 aa33.59■■■□□ 2.97
WIPI1-202ENST00000546360 FANCD2Q9BXW9 1451 aa33.54■■■□□ 2.96
WIPI1-202ENST00000546360 CEP164Q9UPV0 1460 aa33.48■■■□□ 2.95
WIPI1-202ENST00000546360 CUX2O14529 1486 aa33.44■■■□□ 2.94
WIPI1-202ENST00000546360 MRC2Q9UBG0 1479 aa33.41■■■□□ 2.94
WIPI1-202ENST00000546360 WDR62O43379 1518 aa33.33■■■□□ 2.93
WIPI1-202ENST00000546360 URB2Q14146 1524 aaKnown RBP33.25■■■□□ 2.91
WIPI1-202ENST00000546360 TOPBP1Q92547 1522 aa33.03■■■□□ 2.88
WIPI1-202ENST00000546360 DNMBPQ6XZF7 1577 aa33■■■□□ 2.87
WIPI1-202ENST00000546360 ABCC8Q09428 1581 aa32.9■■■□□ 2.86
WIPI1-202ENST00000546360 CUX1P39880 1505 aa32.87■■■□□ 2.85
WIPI1-202ENST00000546360 POLA1P09884 1462 aaPredicted RBP32.76■■■□□ 2.84
WIPI1-202ENST00000546360 IFT140Q96RY7 1462 aa32.73■■■□□ 2.83
WIPI1-202ENST00000546360 FGD5Q6ZNL6 1462 aa32.71■■■□□ 2.83
WIPI1-202ENST00000546360 TARBP1Q13395 1621 aaKnown RBP32.7■■■□□ 2.83
WIPI1-202ENST00000546360 ZNF608Q9ULD9 1512 aaPredicted RBP32.68■■■□□ 2.82
WIPI1-202ENST00000546360 SYNJ1O43426 1573 aa32.65■■■□□ 2.82
WIPI1-202ENST00000546360 RAD54L2Q9Y4B4 1467 aa32.64■■■□□ 2.82
WIPI1-202ENST00000546360 WRNQ14191 1432 aaPredicted RBP eCLIP32.61■■■□□ 2.81
WIPI1-202ENST00000546360 BIVM-ERCC5R4GMW8 1640 aa32.6■■■□□ 2.81
WIPI1-202ENST00000546360 EIF4G3O43432 1585 aaKnown RBP32.59■■■□□ 2.81
WIPI1-202ENST00000546360 TOP2BQ02880 1626 aa32.58■■■□□ 2.81
WIPI1-202ENST00000546360 SOGA1O94964 1423 aa32.56■■■□□ 2.8
WIPI1-202ENST00000546360 WDR97A6NE52 1622 aa32.51■■■□□ 2.8
WIPI1-202ENST00000546360 AQRO60306 1485 aaKnown RBP eCLIP32.47■■■□□ 2.796e-6■■■■□ 23.2
WIPI1-202ENST00000546360 TDRD9Q8NDG6 1382 aaKnown RBP32.41■■■□□ 2.78
WIPI1-202ENST00000546360 ABCA10Q8WWZ4 1543 aa32.35■■■□□ 2.77
WIPI1-202ENST00000546360 ABCA5Q8WWZ7 1642 aa32.29■■■□□ 2.76
WIPI1-202ENST00000546360 PBRM1Q86U86 1689 aa32.26■■■□□ 2.76
WIPI1-202ENST00000546360 DNAJC5Q9H3Z4 198 aa32.25■■■□□ 2.75
WIPI1-202ENST00000546360 GAPVD1Q14C86 1478 aa32.22■■■□□ 2.75
WIPI1-202ENST00000546360 SNAPC4Q5SXM2 1469 aa32.2■■■□□ 2.74
WIPI1-202ENST00000546360 CHD1O14646 1710 aa32.19■■■□□ 2.74
WIPI1-202ENST00000546360 GRIN2BQ13224 1484 aa32.18■■■□□ 2.74
WIPI1-202ENST00000546360 MAGI1Q96QZ7 1491 aaPredicted RBP32.08■■■□□ 2.73
WIPI1-202ENST00000546360 FBLN2P98095 1184 aa32■■■□□ 2.71
WIPI1-202ENST00000546360 OSCARQ8IYS5 282 aa32■■■□□ 2.71
WIPI1-202ENST00000546360 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
WIPI1-202ENST00000546360 SYNJ2O15056 1496 aa31.96■■■□□ 2.71
WIPI1-202ENST00000546360 ERICH3Q5RHP9 1530 aa31.95■■■□□ 2.71
WIPI1-202ENST00000546360 CHMP7Q8WUX9 453 aaPredicted RBP31.88■■■□□ 2.69
WIPI1-202ENST00000546360 KIF27Q86VH2 1401 aa31.88■■■□□ 2.69
WIPI1-202ENST00000546360 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
WIPI1-202ENST00000546360 FHAD1B1AJZ9 1412 aa31.82■■■□□ 2.68
WIPI1-202ENST00000546360 GRIN2AQ12879 1464 aa31.8■■■□□ 2.68
WIPI1-202ENST00000546360 CLASP1Q7Z460 1538 aa31.77■■■□□ 2.68
WIPI1-202ENST00000546360 RUSC2Q8N2Y8 1516 aa31.77■■■□□ 2.68
WIPI1-202ENST00000546360 IGF1RP08069 1367 aa31.75■■■□□ 2.67
WIPI1-202ENST00000546360 CUL7Q14999 1698 aa31.73■■■□□ 2.67
WIPI1-202ENST00000546360 CEP170Q5SW79 1584 aa31.71■■■□□ 2.67
WIPI1-202ENST00000546360 RIMBP3CA6NJZ7 1639 aa31.68■■■□□ 2.66
WIPI1-202ENST00000546360 RIMBP3BA6NNM3 1639 aa31.68■■■□□ 2.66
WIPI1-202ENST00000546360 RIMBP3Q9UFD9 1639 aa31.68■■■□□ 2.66
WIPI1-202ENST00000546360 ARHGEF11O15085 1522 aa31.64■■■□□ 2.66
WIPI1-202ENST00000546360 NUP160Q12769 1436 aa31.64■■■□□ 2.66
WIPI1-202ENST00000546360 CHIC1Q5VXU3 224 aa31.58■■■□□ 2.65
WIPI1-202ENST00000546360 CARMIL1Q5VZK9 1371 aa31.56■■■□□ 2.64
WIPI1-202ENST00000546360 SHROOM2Q13796 1616 aa31.45■■■□□ 2.62
WIPI1-202ENST00000546360 ERCC6L2Q5T890 1561 aa31.42■■■□□ 2.62
WIPI1-202ENST00000546360 ARAP1Q96P48 1450 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms