Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
ZNF408Q9H9D4 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.22■■■□□ 2.43
ZNF408Q9H9D4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
ZNF408Q9H9D4 AC010980.1-201ENST00000587192 1142 ntBASIC30.21■■■□□ 2.43
ZNF408Q9H9D4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ZNF408Q9H9D4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.2■■■□□ 2.43
ZNF408Q9H9D4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
ZNF408Q9H9D4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
ZNF408Q9H9D4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.2■■■□□ 2.43
ZNF408Q9H9D4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
ZNF408Q9H9D4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ZNF408Q9H9D4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC30.19■■■□□ 2.42
ZNF408Q9H9D4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.19■■■□□ 2.42
ZNF408Q9H9D4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ZNF408Q9H9D4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.18■■■□□ 2.42
ZNF408Q9H9D4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ZNF408Q9H9D4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZNF408Q9H9D4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
ZNF408Q9H9D4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ZNF408Q9H9D4 AC009299.2-201ENST00000482477 511 ntBASIC30.16■■■□□ 2.42
ZNF408Q9H9D4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ZNF408Q9H9D4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ZNF408Q9H9D4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ZNF408Q9H9D4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
ZNF408Q9H9D4 THA1P-201ENST00000590384 1145 ntBASIC30.14■■■□□ 2.42
ZNF408Q9H9D4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
ZNF408Q9H9D4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
ZNF408Q9H9D4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ZNF408Q9H9D4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.13■■■□□ 2.41
ZNF408Q9H9D4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
ZNF408Q9H9D4 DUX4L9-201ENST00000449051 1259 ntBASIC30.12■■■□□ 2.41
ZNF408Q9H9D4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZNF408Q9H9D4 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZNF408Q9H9D4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZNF408Q9H9D4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZNF408Q9H9D4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZNF408Q9H9D4 SMPD5-203ENST00000639008 1464 ntBASIC30.11■■■□□ 2.41
ZNF408Q9H9D4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
ZNF408Q9H9D4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ZNF408Q9H9D4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ZNF408Q9H9D4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.1■■■□□ 2.41
ZNF408Q9H9D4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ZNF408Q9H9D4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
ZNF408Q9H9D4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
ZNF408Q9H9D4 RP9P-202ENST00000450133 1212 ntBASIC30.09■■■□□ 2.41
ZNF408Q9H9D4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.09■■■□□ 2.41
ZNF408Q9H9D4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.09■■■□□ 2.41
ZNF408Q9H9D4 AC026202.3-201ENST00000600805 1127 ntBASIC30.09■■■□□ 2.41
ZNF408Q9H9D4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZNF408Q9H9D4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZNF408Q9H9D4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ZNF408Q9H9D4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.07■■■□□ 2.4
ZNF408Q9H9D4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.07■■■□□ 2.4
ZNF408Q9H9D4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ZNF408Q9H9D4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF408Q9H9D4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF408Q9H9D4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
ZNF408Q9H9D4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF408Q9H9D4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF408Q9H9D4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
ZNF408Q9H9D4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.06■■■□□ 2.4
ZNF408Q9H9D4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZNF408Q9H9D4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZNF408Q9H9D4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ZNF408Q9H9D4 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.04■■■□□ 2.4
ZNF408Q9H9D4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.03■■■□□ 2.4
ZNF408Q9H9D4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.03■■■□□ 2.4
ZNF408Q9H9D4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ZNF408Q9H9D4 YBX1P4-201ENST00000392794 808 ntBASIC30.03■■■□□ 2.4
ZNF408Q9H9D4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ZNF408Q9H9D4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.02■■■□□ 2.4
ZNF408Q9H9D4 AC139795.1-202ENST00000500444 432 ntBASIC30.02■■■□□ 2.4
ZNF408Q9H9D4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
ZNF408Q9H9D4 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
ZNF408Q9H9D4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ZNF408Q9H9D4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ZNF408Q9H9D4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC30.01■■■□□ 2.39
ZNF408Q9H9D4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30■■■□□ 2.39
ZNF408Q9H9D4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30■■■□□ 2.39
ZNF408Q9H9D4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30■■■□□ 2.39
ZNF408Q9H9D4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZNF408Q9H9D4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZNF408Q9H9D4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
ZNF408Q9H9D4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
ZNF408Q9H9D4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC29.98■■■□□ 2.39
ZNF408Q9H9D4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
ZNF408Q9H9D4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC29.98■■■□□ 2.39
ZNF408Q9H9D4 MIR935-201ENST00000401179 91 ntBASIC29.98■■■□□ 2.39
ZNF408Q9H9D4 GUSBP5-201ENST00000418136 578 ntBASIC29.98■■■□□ 2.39
ZNF408Q9H9D4 SPCS2P3-201ENST00000500401 656 ntBASIC29.98■■■□□ 2.39
ZNF408Q9H9D4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.98■■■□□ 2.39
ZNF408Q9H9D4 AC074183.2-201ENST00000623112 922 ntBASIC29.98■■■□□ 2.39
ZNF408Q9H9D4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
ZNF408Q9H9D4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC29.97■■■□□ 2.39
ZNF408Q9H9D4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
ZNF408Q9H9D4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC29.96■■■□□ 2.39
ZNF408Q9H9D4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
ZNF408Q9H9D4 OR2A1-AS1-204ENST00000470435 602 ntBASIC29.96■■■□□ 2.39
ZNF408Q9H9D4 AC103834.1-201ENST00000520383 144 ntBASIC29.96■■■□□ 2.39
ZNF408Q9H9D4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms