Protein–RNA interactions for Protein: Q9H2B2

SYT4, Synaptotagmin-4, humanhuman

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYT4Q9H2B2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SYT4Q9H2B2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
SYT4Q9H2B2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.48■■□□□ 1.19
SYT4Q9H2B2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.48■■□□□ 1.19
SYT4Q9H2B2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SYT4Q9H2B2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
SYT4Q9H2B2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.47■■□□□ 1.19
SYT4Q9H2B2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SYT4Q9H2B2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SYT4Q9H2B2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.46■■□□□ 1.19
SYT4Q9H2B2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC22.46■■□□□ 1.19
SYT4Q9H2B2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
SYT4Q9H2B2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
SYT4Q9H2B2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SYT4Q9H2B2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SYT4Q9H2B2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SYT4Q9H2B2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SYT4Q9H2B2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.44■■□□□ 1.18
SYT4Q9H2B2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SYT4Q9H2B2 AC021231.2-201ENST00000594613 730 ntBASIC22.43■■□□□ 1.18
SYT4Q9H2B2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SYT4Q9H2B2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SYT4Q9H2B2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.42■■□□□ 1.18
SYT4Q9H2B2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SYT4Q9H2B2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.42■■□□□ 1.18
SYT4Q9H2B2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SYT4Q9H2B2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.42■■□□□ 1.18
SYT4Q9H2B2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
SYT4Q9H2B2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SYT4Q9H2B2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SYT4Q9H2B2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SYT4Q9H2B2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
SYT4Q9H2B2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SYT4Q9H2B2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
SYT4Q9H2B2 DUX4L29-201ENST00000425409 679 ntBASIC22.39■■□□□ 1.17
SYT4Q9H2B2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.39■■□□□ 1.17
SYT4Q9H2B2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SYT4Q9H2B2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
SYT4Q9H2B2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SYT4Q9H2B2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
SYT4Q9H2B2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC22.38■■□□□ 1.17
SYT4Q9H2B2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SYT4Q9H2B2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SYT4Q9H2B2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
SYT4Q9H2B2 AC110285.7-201ENST00000624417 1536 ntBASIC22.37■■□□□ 1.17
SYT4Q9H2B2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
SYT4Q9H2B2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.36■■□□□ 1.17
SYT4Q9H2B2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SYT4Q9H2B2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SYT4Q9H2B2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SYT4Q9H2B2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SYT4Q9H2B2 RPS2P35-201ENST00000443417 897 ntBASIC22.35■■□□□ 1.17
SYT4Q9H2B2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
SYT4Q9H2B2 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
SYT4Q9H2B2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYT4Q9H2B2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYT4Q9H2B2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SYT4Q9H2B2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.34■■□□□ 1.17
SYT4Q9H2B2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYT4Q9H2B2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SYT4Q9H2B2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.34■■□□□ 1.17
SYT4Q9H2B2 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYT4Q9H2B2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
SYT4Q9H2B2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.33■■□□□ 1.16
SYT4Q9H2B2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYT4Q9H2B2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SYT4Q9H2B2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.32■■□□□ 1.16
SYT4Q9H2B2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYT4Q9H2B2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.32■■□□□ 1.16
SYT4Q9H2B2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.32■■□□□ 1.16
SYT4Q9H2B2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SYT4Q9H2B2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYT4Q9H2B2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.31■■□□□ 1.16
SYT4Q9H2B2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYT4Q9H2B2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYT4Q9H2B2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
SYT4Q9H2B2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYT4Q9H2B2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
SYT4Q9H2B2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYT4Q9H2B2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.3■■□□□ 1.16
SYT4Q9H2B2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.3■■□□□ 1.16
SYT4Q9H2B2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.3■■□□□ 1.16
SYT4Q9H2B2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.3■■□□□ 1.16
SYT4Q9H2B2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYT4Q9H2B2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYT4Q9H2B2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.29■■□□□ 1.16
SYT4Q9H2B2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYT4Q9H2B2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.29■■□□□ 1.16
SYT4Q9H2B2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYT4Q9H2B2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SYT4Q9H2B2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYT4Q9H2B2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SYT4Q9H2B2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYT4Q9H2B2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SYT4Q9H2B2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYT4Q9H2B2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.27■■□□□ 1.16
SYT4Q9H2B2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SYT4Q9H2B2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
SYT4Q9H2B2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.26■■□□□ 1.15
SYT4Q9H2B2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms