Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 AC127502.1-201ENST00000399971 1502 ntBASIC25.19■■□□□ 1.62
LSMEM2Q8N112 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.19■■□□□ 1.62
LSMEM2Q8N112 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LSMEM2Q8N112 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.18■■□□□ 1.62
LSMEM2Q8N112 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LSMEM2Q8N112 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.18■■□□□ 1.62
LSMEM2Q8N112 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.18■■□□□ 1.62
LSMEM2Q8N112 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LSMEM2Q8N112 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
LSMEM2Q8N112 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
LSMEM2Q8N112 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LSMEM2Q8N112 BX255925.1-201ENST00000566954 1854 ntBASIC25.17■■□□□ 1.62
LSMEM2Q8N112 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LSMEM2Q8N112 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LSMEM2Q8N112 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
LSMEM2Q8N112 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LSMEM2Q8N112 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
LSMEM2Q8N112 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
LSMEM2Q8N112 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.14■■□□□ 1.61
LSMEM2Q8N112 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.13■■□□□ 1.61
LSMEM2Q8N112 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.13■■□□□ 1.61
LSMEM2Q8N112 RARRES2P2-201ENST00000394842 485 ntBASIC25.13■■□□□ 1.61
LSMEM2Q8N112 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.13■■□□□ 1.61
LSMEM2Q8N112 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LSMEM2Q8N112 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
LSMEM2Q8N112 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.12■■□□□ 1.61
LSMEM2Q8N112 ABHD17AP5-201ENST00000580133 923 ntBASIC25.12■■□□□ 1.61
LSMEM2Q8N112 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
LSMEM2Q8N112 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSMEM2Q8N112 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
LSMEM2Q8N112 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
LSMEM2Q8N112 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
LSMEM2Q8N112 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LSMEM2Q8N112 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.1■■□□□ 1.61
LSMEM2Q8N112 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.1■■□□□ 1.61
LSMEM2Q8N112 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.1■■□□□ 1.61
LSMEM2Q8N112 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.1■■□□□ 1.61
LSMEM2Q8N112 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
LSMEM2Q8N112 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
LSMEM2Q8N112 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.09■■□□□ 1.61
LSMEM2Q8N112 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC25.09■■□□□ 1.61
LSMEM2Q8N112 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
LSMEM2Q8N112 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LSMEM2Q8N112 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.6
LSMEM2Q8N112 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSMEM2Q8N112 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.07■■□□□ 1.6
LSMEM2Q8N112 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSMEM2Q8N112 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LSMEM2Q8N112 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
LSMEM2Q8N112 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.06■■□□□ 1.6
LSMEM2Q8N112 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
LSMEM2Q8N112 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.06■■□□□ 1.6
LSMEM2Q8N112 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
LSMEM2Q8N112 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
LSMEM2Q8N112 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.05■■□□□ 1.6
LSMEM2Q8N112 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.05■■□□□ 1.6
LSMEM2Q8N112 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
LSMEM2Q8N112 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.04■■□□□ 1.6
LSMEM2Q8N112 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
LSMEM2Q8N112 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
LSMEM2Q8N112 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.04■■□□□ 1.6
LSMEM2Q8N112 LINC01003-201ENST00000564834 1764 ntBASIC25.03■■□□□ 1.6
LSMEM2Q8N112 GPX1-201ENST00000419349 1106 ntBASIC25.03■■□□□ 1.6
LSMEM2Q8N112 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.03■■□□□ 1.6
LSMEM2Q8N112 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
LSMEM2Q8N112 AC100797.4-201ENST00000631653 1827 ntBASIC25.02■■□□□ 1.6
LSMEM2Q8N112 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LSMEM2Q8N112 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LSMEM2Q8N112 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.02■■□□□ 1.6
LSMEM2Q8N112 RNF126P1-201ENST00000567452 1320 ntBASIC25.02■■□□□ 1.6
LSMEM2Q8N112 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.02■■□□□ 1.6
LSMEM2Q8N112 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.02■■□□□ 1.6
LSMEM2Q8N112 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LSMEM2Q8N112 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
LSMEM2Q8N112 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LSMEM2Q8N112 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
LSMEM2Q8N112 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LSMEM2Q8N112 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LSMEM2Q8N112 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25■■□□□ 1.59
LSMEM2Q8N112 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
LSMEM2Q8N112 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LSMEM2Q8N112 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
LSMEM2Q8N112 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.99■■□□□ 1.59
LSMEM2Q8N112 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.99■■□□□ 1.59
LSMEM2Q8N112 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
LSMEM2Q8N112 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
LSMEM2Q8N112 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
LSMEM2Q8N112 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LSMEM2Q8N112 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LSMEM2Q8N112 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.97■■□□□ 1.59
LSMEM2Q8N112 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
LSMEM2Q8N112 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms