Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.81■■□□□ 1.56
CPNE9Q8IYJ1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CPNE9Q8IYJ1 LINC01971-201ENST00000617888 1048 ntBASIC24.81■■□□□ 1.56
CPNE9Q8IYJ1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CPNE9Q8IYJ1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CPNE9Q8IYJ1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPNE9Q8IYJ1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPNE9Q8IYJ1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.8■■□□□ 1.56
CPNE9Q8IYJ1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CPNE9Q8IYJ1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPNE9Q8IYJ1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.8■■□□□ 1.56
CPNE9Q8IYJ1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.8■■□□□ 1.56
CPNE9Q8IYJ1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CPNE9Q8IYJ1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPNE9Q8IYJ1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPNE9Q8IYJ1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.79■■□□□ 1.56
CPNE9Q8IYJ1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.79■■□□□ 1.56
CPNE9Q8IYJ1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CPNE9Q8IYJ1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPNE9Q8IYJ1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPNE9Q8IYJ1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CPNE9Q8IYJ1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
CPNE9Q8IYJ1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.77■■□□□ 1.56
CPNE9Q8IYJ1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.77■■□□□ 1.56
CPNE9Q8IYJ1 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.77■■□□□ 1.56
CPNE9Q8IYJ1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPNE9Q8IYJ1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
CPNE9Q8IYJ1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CPNE9Q8IYJ1 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.77■■□□□ 1.56
CPNE9Q8IYJ1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 ZNRF2P2-203ENST00000454624 420 ntBASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CPNE9Q8IYJ1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
CPNE9Q8IYJ1 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CPNE9Q8IYJ1 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CPNE9Q8IYJ1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPNE9Q8IYJ1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPNE9Q8IYJ1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CPNE9Q8IYJ1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
CPNE9Q8IYJ1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPNE9Q8IYJ1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.73■■□□□ 1.55
CPNE9Q8IYJ1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CPNE9Q8IYJ1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPNE9Q8IYJ1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.72■■□□□ 1.55
CPNE9Q8IYJ1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPNE9Q8IYJ1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CPNE9Q8IYJ1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 DUX4L11-201ENST00000611504 1267 ntBASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 DUX4L12-201ENST00000614593 1267 ntBASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 DUX4L14-201ENST00000621227 1267 ntBASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CPNE9Q8IYJ1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
CPNE9Q8IYJ1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L13-201ENST00000554103 1267 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L15-201ENST00000611059 1267 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L23-201ENST00000615195 1269 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L24-201ENST00000617576 1269 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L22-201ENST00000618238 1269 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L20-201ENST00000619712 1269 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L21-201ENST00000622058 1269 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L10-201ENST00000622460 1267 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 DUX4L25-201ENST00000624915 1269 ntBASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.7■■□□□ 1.54
CPNE9Q8IYJ1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPNE9Q8IYJ1 ABHD17AP4-201ENST00000411545 909 ntBASIC24.69■■□□□ 1.54
CPNE9Q8IYJ1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPNE9Q8IYJ1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CPNE9Q8IYJ1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CPNE9Q8IYJ1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CPNE9Q8IYJ1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CPNE9Q8IYJ1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CPNE9Q8IYJ1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
CPNE9Q8IYJ1 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.67■■□□□ 1.54
CPNE9Q8IYJ1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
CPNE9Q8IYJ1 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CPNE9Q8IYJ1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CPNE9Q8IYJ1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.66■■□□□ 1.54
CPNE9Q8IYJ1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
CPNE9Q8IYJ1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
CPNE9Q8IYJ1 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CPNE9Q8IYJ1 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CPNE9Q8IYJ1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.65■■□□□ 1.54
CPNE9Q8IYJ1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms