Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN54Q6MZP7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.3■■□□□ 1
LIN54Q6MZP7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN54Q6MZP7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LIN54Q6MZP7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN54Q6MZP7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.3■■□□□ 1
LIN54Q6MZP7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LIN54Q6MZP7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LIN54Q6MZP7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN54Q6MZP7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.29■■□□□ 1
LIN54Q6MZP7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN54Q6MZP7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LIN54Q6MZP7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LIN54Q6MZP7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LIN54Q6MZP7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.27■■□□□ 1
LIN54Q6MZP7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.27■■□□□ 1
LIN54Q6MZP7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LIN54Q6MZP7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LIN54Q6MZP7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LIN54Q6MZP7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.26■□□□□ 0.99
LIN54Q6MZP7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LIN54Q6MZP7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LIN54Q6MZP7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
LIN54Q6MZP7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.25■□□□□ 0.99
LIN54Q6MZP7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LIN54Q6MZP7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
LIN54Q6MZP7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
LIN54Q6MZP7 AC091060.1-201ENST00000623524 1766 ntBASIC21.23■□□□□ 0.99
LIN54Q6MZP7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.23■□□□□ 0.99
LIN54Q6MZP7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN54Q6MZP7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN54Q6MZP7 SUZ12P1-203ENST00000578195 985 ntBASIC21.23■□□□□ 0.99
LIN54Q6MZP7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN54Q6MZP7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIN54Q6MZP7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIN54Q6MZP7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.22■□□□□ 0.99
LIN54Q6MZP7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LIN54Q6MZP7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LIN54Q6MZP7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
LIN54Q6MZP7 AP004833.2-201ENST00000532228 1454 ntBASIC21.21■□□□□ 0.99
LIN54Q6MZP7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN54Q6MZP7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
LIN54Q6MZP7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.21■□□□□ 0.99
LIN54Q6MZP7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
LIN54Q6MZP7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN54Q6MZP7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN54Q6MZP7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIN54Q6MZP7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN54Q6MZP7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN54Q6MZP7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN54Q6MZP7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN54Q6MZP7 AC020928.2-201ENST00000588717 2197 ntBASIC21.18■□□□□ 0.98
LIN54Q6MZP7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN54Q6MZP7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIN54Q6MZP7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIN54Q6MZP7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIN54Q6MZP7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIN54Q6MZP7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.17■□□□□ 0.98
LIN54Q6MZP7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
LIN54Q6MZP7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIN54Q6MZP7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIN54Q6MZP7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.16■□□□□ 0.98
LIN54Q6MZP7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LIN54Q6MZP7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LIN54Q6MZP7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
LIN54Q6MZP7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIN54Q6MZP7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIN54Q6MZP7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIN54Q6MZP7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.15■□□□□ 0.98
LIN54Q6MZP7 AC145676.1-201ENST00000514988 2004 ntBASIC21.15■□□□□ 0.98
LIN54Q6MZP7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIN54Q6MZP7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.14■□□□□ 0.98
LIN54Q6MZP7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIN54Q6MZP7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LIN54Q6MZP7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LIN54Q6MZP7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.14■□□□□ 0.97
LIN54Q6MZP7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
LIN54Q6MZP7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIN54Q6MZP7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LIN54Q6MZP7 MIR762-201ENST00000390236 83 ntBASIC21.13■□□□□ 0.97
LIN54Q6MZP7 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.13■□□□□ 0.97
LIN54Q6MZP7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LIN54Q6MZP7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LIN54Q6MZP7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms