Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 LINC00273-201ENST00000539813 1452 ntBASIC21.25■□□□□ 0.99
ZNF728P0DKX0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF728P0DKX0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF728P0DKX0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF728P0DKX0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ZNF728P0DKX0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ZNF728P0DKX0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 AC135983.2-203ENST00000454486 1613 ntBASIC21.19■□□□□ 0.98
ZNF728P0DKX0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.19■□□□□ 0.98
ZNF728P0DKX0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
ZNF728P0DKX0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF728P0DKX0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.16■□□□□ 0.98
ZNF728P0DKX0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF728P0DKX0 WHAMMP2-203ENST00000563942 1603 ntBASIC21.15■□□□□ 0.98
ZNF728P0DKX0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF728P0DKX0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ZNF728P0DKX0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF728P0DKX0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF728P0DKX0 AC100797.4-201ENST00000631653 1827 ntBASIC21.13■□□□□ 0.97
ZNF728P0DKX0 AC135731.1-201ENST00000569415 2548 ntBASIC21.13■□□□□ 0.97
ZNF728P0DKX0 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF728P0DKX0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF728P0DKX0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF728P0DKX0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF728P0DKX0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.12■□□□□ 0.97
ZNF728P0DKX0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF728P0DKX0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF728P0DKX0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 ABHD17AP4-201ENST00000411545 909 ntBASIC21.11■□□□□ 0.97
ZNF728P0DKX0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF728P0DKX0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.1■□□□□ 0.97
ZNF728P0DKX0 ZNRF2P2-203ENST00000454624 420 ntBASIC21.1■□□□□ 0.97
ZNF728P0DKX0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.1■□□□□ 0.97
ZNF728P0DKX0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.09■□□□□ 0.97
ZNF728P0DKX0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms